RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 TULP2O00295 520 aa21.86■■□□□ 1.09
CD44-222ENST00000526025 ARID5BQ14865 1188 aa21.86■■□□□ 1.09
CD44-222ENST00000526025 ASIC2Q16515 512 aa21.86■■□□□ 1.09
CD44-222ENST00000526025 PMF1Q6P1K2 205 aa21.86■■□□□ 1.09
CD44-222ENST00000526025 TMEM35BQ8NCS4 154 aa21.86■■□□□ 1.09
CD44-222ENST00000526025 MYADMQ96S97 322 aa21.86■■□□□ 1.09
CD44-222ENST00000526025 TASP1Q9H6P5 420 aa21.86■■□□□ 1.09
CD44-222ENST00000526025 LRRC4Q9HBW1 653 aa21.86■■□□□ 1.09
CD44-222ENST00000526025 CNGB3Q9NQW8 809 aa21.86■■□□□ 1.09
CD44-222ENST00000526025 ZNF840PA6NDX5 716 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 C19orf67A6NJJ6 358 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 FBXO21O94952 628 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 CFHP08603 1231 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 TPM1P09493 284 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 PSEN1P49768 467 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 TUBP50607 506 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 TKTL1P51854 596 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 SNX16P57768 344 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 FMO1Q01740 532 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 PDCLQ13371 301 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 TEAD2Q15562 447 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 TMEM110Q86TL2 294 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 MON1AQ86VX9 555 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 ARHGAP18Q8N392 663 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 ZNF276Q8N554 614 aa21.85■■□□□ 1.09
CD44-222ENST00000526025 TLR8Q9NR97 1041 aaKnown RBP21.85■■□□□ 1.09
CD44-222ENST00000526025 BZW2Q9Y6E2 419 aaKnown RBP21.85■■□□□ 1.09
CD44-222ENST00000526025 UNC80Q8N2C7 3258 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 NRG2O14511 850 aaPredicted RBP21.84■■□□□ 1.09
CD44-222ENST00000526025 ZBED1O96006 694 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 LAMP2P13473 410 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 CHRNB2P17787 502 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 HNRNPH3P31942 346 aaKnown RBP21.84■■□□□ 1.09
CD44-222ENST00000526025 CASP14P31944 242 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 GBP2P32456 591 aaPredicted RBP21.84■■□□□ 1.09
CD44-222ENST00000526025 SIX6OS1Q8N1H7 587 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 WDTC1Q8N5D0 677 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 SLC20A1Q8WUM9 679 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 IRGQQ8WZA9 623 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 SYT11Q9BT88 431 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 PDCL3Q9H2J4 239 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 TRPV4Q9HBA0 871 aa21.84■■□□□ 1.09
CD44-222ENST00000526025 C2CD4DB7Z1M9 353 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 SART1O43290 800 aaKnown RBP21.83■■□□□ 1.09
CD44-222ENST00000526025 GABBR2O75899 941 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 CYP1A1P04798 512 aaPredicted RBP21.83■■□□□ 1.09
CD44-222ENST00000526025 MMEP08473 750 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 SSTR3P32745 418 aaPredicted RBP21.83■■□□□ 1.09
CD44-222ENST00000526025 ARID5AQ03989 594 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 ADIGQ0VDE8 80 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 TBX2Q13207 712 aaPredicted RBP21.83■■□□□ 1.09
CD44-222ENST00000526025 GPR158Q5T848 1215 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 TAF3Q5VWG9 929 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 E4F1Q66K89 784 aaPredicted RBP21.83■■□□□ 1.09
CD44-222ENST00000526025 DRC7Q8IY82 874 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 ING5Q8WYH8 240 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 NXPE3Q969Y0 559 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 RPGRIP1Q96KN7 1286 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 DNAJC7Q99615 494 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 AGPAT1Q99943 283 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 CLIC5Q9NZA1 410 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 GMIPQ9P107 970 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 CYTH4Q9UIA0 394 aa21.83■■□□□ 1.09
CD44-222ENST00000526025 OLFM2O95897 454 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 OAS1P00973 400 aaKnown RBP21.82■■□□□ 1.08
CD44-222ENST00000526025 GJA1P17302 382 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 NOMO3P69849 1222 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 CYP4F8P98187 520 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 IFRD2Q12894 506 aaPredicted RBP21.82■■□□□ 1.08
CD44-222ENST00000526025 PPP1R2P3Q6NXS1 205 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 MTSS1LQ765P7 747 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 PASD1Q8IV76 773 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 MSANTD4Q8NCY6 345 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 C1orf131Q8NDD1 294 aaKnown RBP21.82■■□□□ 1.08
CD44-222ENST00000526025 CPLX3Q8WVH0 158 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 ULBP1Q9BZM6 244 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 MIS12Q9H081 205 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 MYO10Q9HD67 2058 aa21.82■■□□□ 1.08
CD44-222ENST00000526025 ANHXE9PGG2 379 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 USP17L7P0C7H9 530 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 CDC25BP30305 580 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 RGS7P49802 495 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 DAOAP59103 153 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 KLHL30Q0D2K2 578 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 ZNF268Q14587 947 aaPredicted RBP21.81■■□□□ 1.08
CD44-222ENST00000526025 KLHDC10Q6PID8 442 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 BHLHA9Q7RTU4 235 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 TMC6Q7Z403 805 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 ZDHHC17Q8IUH5 632 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 CNGA4Q8IV77 575 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 OR8K1Q8NGG5 319 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 IPO4Q8TEX9 1081 aaKnown RBP21.81■■□□□ 1.08
CD44-222ENST00000526025 SMARCD2Q92925 531 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 E2F7Q96AV8 911 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 MCRS1Q96EZ8 462 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 PPP1R13BQ96KQ4 1090 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 ASB16Q96NS5 453 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 CDK5RAP1Q96SZ6 601 aaKnown RBP21.81■■□□□ 1.08
CD44-222ENST00000526025 SLC46A2Q9BY10 475 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 ST7Q9NRC1 585 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms