RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 RPLP0P6Q8NHW5 317 aa12.78□□□□□ -0.36
SSBP3-210ENST00000525990 CD101Q93033 1021 aa12.78□□□□□ -0.36
SSBP3-210ENST00000525990 CCDC47Q96A33 483 aaKnown RBP12.78□□□□□ -0.36
SSBP3-210ENST00000525990 SLITRK1Q96PX8 696 aa12.78□□□□□ -0.36
SSBP3-210ENST00000525990 ARID3AQ99856 593 aa12.78□□□□□ -0.36
SSBP3-210ENST00000525990 IL37Q9NZH6 218 aa12.78□□□□□ -0.36
SSBP3-210ENST00000525990 DNAH14Q0VDD8 3507 aa12.77□□□□□ -0.36
SSBP3-210ENST00000525990 HHLA1C9JL84 531 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
SSBP3-210ENST00000525990 KRT13P13646 458 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 PSMC2P35998 433 aaKnown RBP12.77□□□□□ -0.37
SSBP3-210ENST00000525990 SLC6A11P48066 632 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 SEC13P55735 322 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 INCA1Q0VD86 236 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 SIM2Q14190 667 aaPredicted RBP12.77□□□□□ -0.37
SSBP3-210ENST00000525990 ZNF394Q53GI3 561 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 ISM2Q6H9L7 571 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 CLEC20AQ6ZU45 233 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 INTS8Q75QN2 995 aaKnown RBP12.77□□□□□ -0.37
SSBP3-210ENST00000525990 TAF4BQ92750 862 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 CSNK1G1Q9HCP0 422 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 ZDHHC4Q9NPG8 344 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 OSER1Q9NX31 292 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.77□□□□□ -0.37
SSBP3-210ENST00000525990 ATP8B3O60423 1300 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 NUP205Q92621 2012 aa12.77□□□□□ -0.37
SSBP3-210ENST00000525990 MYO18AQ92614 2054 aaKnown RBP12.77□□□□□ -0.37
SSBP3-210ENST00000525990 TNRC6BQ9UPQ9 1833 aaKnown RBP12.76□□□□□ -0.37
SSBP3-210ENST00000525990 CEP192Q8TEP8 1941 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 THADAQ6YHU6 1953 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 SDK1Q7Z5N4 2213 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 CEP250Q9BV73 2442 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 FAM92AA1XBS5 289 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 CYP26A1O43174 497 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 KIF20AO95235 890 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 NFATC1O95644 943 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 TBX18O95935 607 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 ZDHHC11BP0C7U3 371 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 IRF1P10914 325 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 P4HA1P13674 534 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 DRD1P21728 446 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 PPP3CCP48454 512 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 DHCR24Q15392 516 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 CCDC6Q16204 474 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 RSPO4Q2I0M5 234 aaPredicted RBP12.76□□□□□ -0.37
SSBP3-210ENST00000525990 CBWD6Q4V339 395 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 CBWD3Q5JTY5 395 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 CBWD5Q5RIA9 395 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 ANKRD40Q6AI12 368 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 RHBDF2Q6PJF5 856 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 WDR5BQ86VZ2 330 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 UNC93AQ86WB7 457 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 ADGRG2Q8IZP9 1017 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 FAM160A2Q8N612 972 aaPredicted RBP12.76□□□□□ -0.37
SSBP3-210ENST00000525990 TATDN2Q93075 761 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 NIF3L1Q9GZT8 377 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 TMEM8AQ9HCN3 771 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 EHD2Q9NZN4 543 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 NUDT5Q9UKK9 219 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 USP18Q9UMW8 372 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 PCDHA5Q9Y5H7 936 aa12.76□□□□□ -0.37
SSBP3-210ENST00000525990 K7EQS6 105 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 MDM4O15151 490 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 CILPO75339 1184 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 CHRM1P11229 460 aaPredicted RBP12.75□□□□□ -0.37
SSBP3-210ENST00000525990 CD44P16070 742 aaKnown RBP12.75□□□□□ -0.37
SSBP3-210ENST00000525990 PFKLP17858 780 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 PDE6CP51160 858 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 KDSRQ06136 332 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 EDRF1Q3B7T1 1238 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 C2orf27AQ580R0 203 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 HECTD3Q5T447 861 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 PPP1R26Q5T8A7 1209 aaPredicted RBP12.75□□□□□ -0.37
SSBP3-210ENST00000525990 ZNF658Q5TYW1 1059 aaPredicted RBP12.75□□□□□ -0.37
SSBP3-210ENST00000525990 LAIR1Q6GTX8 287 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.75□□□□□ -0.37
SSBP3-210ENST00000525990 KBTBD6Q86V97 674 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 BBS7Q8IWZ6 715 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 PDZD8Q8NEN9 1154 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 OVCA2Q8WZ82 227 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 CYFIP2Q96F07 1278 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 HNRNPABQ99729 332 aaKnown RBP12.75□□□□□ -0.37
SSBP3-210ENST00000525990 NT5C1AQ9BXI3 368 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 IMPG2Q9BZV3 1241 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 NMUR1Q9HB89 426 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 GMEB2Q9UKD1 530 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 RAB23Q9ULC3 237 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 SLC8A2Q9UPR5 921 aa12.75□□□□□ -0.37
SSBP3-210ENST00000525990 PLXND1Q9Y4D7 1925 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 MED19A0JLT2 244 aaPredicted RBP12.74□□□□□ -0.37
SSBP3-210ENST00000525990 DCLK1O15075 740 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 TRIM24O15164 1050 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 GREM1O60565 184 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 TLR5O60602 858 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 GADD45BO75293 160 aaPredicted RBP12.74□□□□□ -0.37
SSBP3-210ENST00000525990 FAM200BP0CF97 657 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 HNRNPLP14866 589 aaKnown RBP eCLIP12.74□□□□□ -0.373e-24■■■■■ 36.5
SSBP3-210ENST00000525990 ACO1P21399 889 aaKnown RBP12.74□□□□□ -0.37
SSBP3-210ENST00000525990 RPL13P26373 211 aaKnown RBP12.74□□□□□ -0.37
SSBP3-210ENST00000525990 HOXA6P31267 233 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms