RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 ATP6V1C1P21283 382 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 SP100P23497 879 aaPredicted RBP7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 TBXAS1P24557 533 aaPredicted RBP7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 MIPP30301 263 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 ADSSP30520 456 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 PLK1P53350 603 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 PGGT1BP53609 377 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 CNTN2Q02246 1040 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 SPIRE1Q08AE8 756 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 ANKRD20A4Q4UJ75 823 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 ZC3H12AQ5D1E8 599 aaKnown RBP7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 N4BP2L1Q5TBK1 243 aaPredicted RBP7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 SLFN12LQ6IEE8 588 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 C16orf87Q6PH81 154 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 CCDC60Q8IWA6 550 aaPredicted RBP7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 TMEM161BQ8NDZ6 487 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 HELQQ8TDG4 1101 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 GDPD5Q8WTR4 605 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 PSPC1Q8WXF1 523 aaKnown RBP7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 PTPRN2Q92932 1015 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 CPB2Q96IY4 423 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 PGLYRP2Q96PD5 576 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 ZNF184Q99676 751 aaPredicted RBP7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 ATXN3LQ9H3M9 355 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 TASP1Q9H6P5 420 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 COPS7BQ9H9Q2 264 aaPredicted RBP7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 LRRC4Q9HBW1 653 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 ARHGEF3Q9NR81 526 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 KLK14Q9P0G3 267 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 USP18Q9UMW8 372 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 TELO2Q9Y4R8 837 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 MROH7Q68CQ1 1323 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 NID2Q14112 1375 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 MRC1P22897 1456 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 FMN2Q9NZ56 1722 aa7.21□□□□□ -1.26
TGFBR3-207ENST00000525962 WDR27A2RRH5 827 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 A8MXQ7 604 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 GNGT2O14610 69 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 HMGCRP04035 888 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 PGK2P07205 417 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 ERVK-10P10266 1014 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 TSPAN8P19075 237 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 MCL1Q07820 350 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 PIGHQ14442 188 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 MORF4L2Q15014 288 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 FAM156AQ8NDB6 213 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 TMC2Q8TDI7 906 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 ZNF483Q8TF39 744 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 KIF12Q96FN5 646 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 FAM210AQ96ND0 272 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 SLITRK1Q96PX8 696 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 EBF4Q9BQW3 602 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 EPB41L4BQ9H329 900 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 AAASQ9NRG9 546 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 TAS2R1Q9NYW7 299 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 NOCTQ9UK39 431 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 CLEC11AQ9Y240 323 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 DTNAQ9Y4J8 743 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 RPS6KL1Q9Y6S9 549 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 TCRBV9S1A1TA0A576 114 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 HNRNPRO43390 633 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 FDX1P10109 184 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 HOXA7P31268 230 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 CLK2P49760 499 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 STX1BP61266 288 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 CDK16Q00536 496 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 BLMHQ13867 455 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 FLOT2Q14254 428 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 MSS51Q4VC12 460 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 STRIP1Q5VSL9 837 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 RNF43Q68DV7 783 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 RSBN1LQ6PCB5 846 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 ENOSF1Q7L5Y1 443 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 CMC1Q7Z7K0 106 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 C12orf29Q8N999 325 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 SH3TC2Q8TF17 1288 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 THAP11Q96EK4 314 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 FAXDC2Q96IV6 333 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 CATSPER2Q96P56 530 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 PDCD2LQ9BRP1 358 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 C17orf75Q9HAS0 396 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 KRT82Q9NSB4 513 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 PNPOQ9NVS9 261 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 STARD13Q9Y3M8 1113 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 MYH7P12883 1935 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 KDM4FA0A1W2PPD8 638 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 CAPN8A6NHC0 703 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 PSTPIP1O43586 416 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 PAEPP09466 180 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 MCF2P10911 925 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 ACADSP16219 412 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 TBL3Q12788 808 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 PCSK7Q16549 785 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 PPM1JQ5JR12 505 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 TTC39BQ5VTQ0 682 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 HPS6Q86YV9 775 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 PCDH20Q8N6Y1 951 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 EIF1ADQ8N9N8 165 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 SERAC1Q96JX3 654 aa7.2□□□□□ -1.26
TGFBR3-207ENST00000525962 NIF3L1Q9GZT8 377 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms