RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 UPF3AQ9H1J1 476 aaKnown RBP5.81□□□□□ -1.48
SVIP-202ENST00000525670 SLITRK6Q9H5Y7 841 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 MLXIPQ9HAP2 919 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 TRMT13Q9NUP7 481 aaKnown RBP5.81□□□□□ -1.48
SVIP-202ENST00000525670 TCEAL9Q9UHQ7 104 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 NRBP1Q9UHY1 535 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 LIMCH1Q9UPQ0 1083 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 VWA7Q9Y334 891 aa5.81□□□□□ -1.48
SVIP-202ENST00000525670 SCN10AQ9Y5Y9 1956 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 STK36Q9NRP7 1315 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 TANC1Q9C0D5 1861 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 A0A0U1RQG5 324 aaPredicted RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 CCDC194A0A1B0GVG4 234 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 KIF28PB7ZC32 967 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 FAM86B1E9PN63 330 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 hCG_1984214I3L0E3 225 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 FIBPO43427 364 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 SLC26A4O43511 780 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 SLC37A4O43826 429 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 EIF5BO60841 1220 aaKnown RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 EIF3JO75822 258 aaKnown RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 FAM86B2P0C5J1 330 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 CYP2C9P11712 490 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 SMARCA1P28370 1054 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 GJB2P29033 226 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 KRT2P35908 639 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 SREBF1P36956 1147 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 RGS19P49795 217 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 CPT1AP50416 773 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 EVCP57679 992 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 IGBP1P78318 339 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 PURAQ00577 322 aaKnown RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 IRF9Q00978 393 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 ALDH6A1Q02252 535 aaKnown RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 HHEXQ03014 270 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 ITGB3BPQ13352 177 aaPredicted RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 TRIM29Q14134 588 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 NPY5RQ15761 445 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 ARHGAP44Q17R89 818 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 LETM2Q2VYF4 491 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 KRT40Q6A162 431 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 IQSEC1Q6DN90 963 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 CC2D1AQ6P1N0 951 aaPredicted RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 CCDC62Q6P9F0 684 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 SLC39A5Q6ZMH5 540 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 PLA2G4DQ86XP0 818 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 BLIDQ8IZY5 108 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 FBXL16Q8N461 479 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 ZNF808Q8N4W9 903 aaPredicted RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 ZNF713Q8N859 430 aaPredicted RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 KLHDC9Q8NEP7 349 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 IL17DQ8TAD2 202 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 FOXRED1Q96CU9 486 aaPredicted RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 TMX3Q96JJ7 454 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 C8orf76Q96K31 380 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 INPP4AQ96PE3 977 aaPredicted RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 IWS1Q96ST2 819 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 ZMYND12Q9H0C1 365 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 TRIM39Q9HCM9 518 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 AURKAIP1Q9NWT8 199 aaPredicted RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 ING1Q9UK53 422 aaPredicted RBP5.8□□□□□ -1.48
SVIP-202ENST00000525670 SZT2Q5T011 3432 aa5.8□□□□□ -1.48
SVIP-202ENST00000525670 GRIN2DO15399 1336 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 VPS37CA5D8V6 355 aaPredicted RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 TRIM43BA6NCK2 446 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 BTBD18B2RXH4 712 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 NARSO43776 548 aaKnown RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 ZEB2O60315 1214 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 CCNT1O60563 726 aaKnown RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 LGALS2P05162 132 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 CLTBP09497 229 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 KCNA2P16389 499 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 ITGB8P26012 769 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 CST5P28325 142 aaPredicted RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 GNA11P29992 359 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 CYP2C18P33260 490 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 TCF7P36402 384 aaPredicted RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 CCL23P55773 120 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 GHRHRQ02643 423 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 ABHD18Q0P651 414 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 ITGA7Q13683 1181 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 NONOQ15233 471 aaKnown RBP eCLIP5.79□□□□□ -1.48
SVIP-202ENST00000525670 KIAA0753Q2KHM9 967 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 LSM12Q3MHD2 195 aaKnown RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 CEP55Q53EZ4 464 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 C2orf27AQ580R0 203 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 BRDTQ58F21 947 aaPredicted RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 CELF3Q5SZQ8 465 aaKnown RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 IGFL4Q6B9Z1 124 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 CCSAPQ6IQ19 270 aaPredicted RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 RTN4RL1Q86UN2 441 aaPredicted RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 DIS3L2Q8IYB7 885 aaKnown RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 BCL6BQ8N143 479 aaPredicted RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 PCSK9Q8NBP7 692 aaKnown RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 BICD2Q8TD16 824 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 TRAPPC12Q8WVT3 735 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 ERCC4Q92889 916 aaPredicted RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 BADQ92934 168 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 E2F7Q96AV8 911 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 TRIM43Q96BQ3 446 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms