RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 GMIPQ9P107 970 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 CHORDC1Q9UHD1 332 aaPredicted RBP18.52■□□□□ 0.56
NR1H3-228ENST00000525441 LEFTY2O00292 366 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 AFPP02771 609 aaKnown RBP18.51■□□□□ 0.55
NR1H3-228ENST00000525441 MBL2P11226 248 aaPredicted RBP18.51■□□□□ 0.55
NR1H3-228ENST00000525441 ARSAP15289 507 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 NBL1P41271 181 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 MRE11P49959 708 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 KCNH2Q12809 1159 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 NR1H3Q13133 447 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 FZD5Q13467 585 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 DGKKQ5KSL6 1271 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 PPP1R26Q5T8A7 1209 aaPredicted RBP18.51■□□□□ 0.55
NR1H3-228ENST00000525441 ARHGAP17Q68EM7 881 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 RIN3Q8TB24 985 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 JAKMIP2Q96AA8 810 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 RNF38Q9H0F5 515 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 CHRDQ9H2X0 955 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 TLR8Q9NR97 1041 aaKnown RBP18.51■□□□□ 0.55
NR1H3-228ENST00000525441 DACH1Q9UI36 760 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 FBXO4Q9UKT5 387 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 CPQQ9Y646 472 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 WNT6Q9Y6F9 365 aa18.51■□□□□ 0.55
NR1H3-228ENST00000525441 KIF26AQ9ULI4 1882 aaPredicted RBP18.5■□□□□ 0.55
NR1H3-228ENST00000525441 MYH10P35580 1976 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 GOLGA6L22H0YM25 854 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 SLC9A3R1O14745 358 aaPredicted RBP18.5■□□□□ 0.55
NR1H3-228ENST00000525441 ZDHHC11BP0C7U3 371 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 CHRNB1P11230 501 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 ACO1P21399 889 aaKnown RBP18.5■□□□□ 0.55
NR1H3-228ENST00000525441 TXNDC11Q6PKC3 985 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 ALYREFQ86V81 257 aaKnown RBP18.5■□□□□ 0.55
NR1H3-228ENST00000525441 PHOX2BQ99453 314 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 NACA2Q9H009 215 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 ECT2Q9H8V3 914 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 LMBRD1Q9NUN5 540 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 SMPD4Q9NXE4 827 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 SCML2Q9UQR0 700 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 CACNA1IQ9P0X4 2223 aa18.5■□□□□ 0.55
NR1H3-228ENST00000525441 HHLA1C9JL84 531 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 PROB1E7EW31 1015 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 COCHO43405 550 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 NFATC1O95644 943 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 SP9P0CG40 484 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 PPP2R5DQ14738 602 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 PON2Q15165 354 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 TPD52L1Q16890 204 aaPredicted RBP18.49■□□□□ 0.55
NR1H3-228ENST00000525441 EML3Q32P44 896 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 SGO2Q562F6 1265 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 ZC3H14Q6PJT7 736 aaKnown RBP18.49■□□□□ 0.55
NR1H3-228ENST00000525441 PPM1KQ8N3J5 372 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 SYNPOQ8N3V7 929 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 UBXN6Q9BZV1 441 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 KIAA1257Q9ULG3 409 aa18.49■□□□□ 0.55
NR1H3-228ENST00000525441 CD19P15391 556 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 KIF11P52732 1056 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 GRSF1Q12849 480 aaKnown RBP eCLIP18.48■□□□□ 0.55
NR1H3-228ENST00000525441 MTAPQ13126 283 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 ZNF528Q3MIS6 628 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 MAMSTRQ6ZN01 415 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 GPRIN1Q7Z2K8 1008 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 CREBRFQ8IUR6 639 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 ANKRD52Q8NB46 1076 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 EHBP1Q8NDI1 1231 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 CNOT6LQ96LI5 555 aaKnown RBP18.48■□□□□ 0.55
NR1H3-228ENST00000525441 CCSER2Q9H7U1 834 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 CFAP97Q9P2B7 532 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 HESX1Q9UBX0 185 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 PCDHB4Q9Y5E5 795 aa18.48■□□□□ 0.55
NR1H3-228ENST00000525441 OTOL1A6NHN0 477 aaPredicted RBP18.47■□□□□ 0.55
NR1H3-228ENST00000525441 TRDMT1O14717 391 aaKnown RBP18.47■□□□□ 0.55
NR1H3-228ENST00000525441 CYP26A1O43174 497 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 TLR5O60602 858 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 PAEPP09466 180 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 VDRP11473 427 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 GJA4P35212 333 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 PSEN1P49768 467 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 CCR3P51677 355 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 BCAT1P54687 386 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 ZXDBP98169 803 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 GCNT1Q02742 428 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 CSTF1Q05048 431 aaKnown RBP18.47■□□□□ 0.55
NR1H3-228ENST00000525441 TMEM270Q6UE05 265 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 TADA2BQ86TJ2 420 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 FAM114A1Q8IWE2 563 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 MAML2Q8IZL2 1156 aaPredicted RBP18.47■□□□□ 0.55
NR1H3-228ENST00000525441 UBR7Q8N806 425 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 LMO3Q8TAP4 145 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 LINC00597Q9H2U6 94 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 SEMA4AQ9H3S1 761 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 TBC1D14Q9P2M4 693 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 SH3BP1Q9Y3L3 701 aa18.47■□□□□ 0.55
NR1H3-228ENST00000525441 HELZP42694 1942 aaKnown RBP18.47■□□□□ 0.55
NR1H3-228ENST00000525441 E2F8A0AVK6 867 aa18.46■□□□□ 0.55
NR1H3-228ENST00000525441 ERCC5P28715 1186 aaPredicted RBP18.46■□□□□ 0.55
NR1H3-228ENST00000525441 GOLGA8FQ08AF8 430 aa18.46■□□□□ 0.55
NR1H3-228ENST00000525441 GOLGA8DPQ0D2H9 430 aa18.46■□□□□ 0.55
NR1H3-228ENST00000525441 CCINQ13939 588 aa18.46■□□□□ 0.55
NR1H3-228ENST00000525441 GOLGA7BQ2TAP0 167 aa18.46■□□□□ 0.55
NR1H3-228ENST00000525441 TMEM196Q5HYL7 178 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms