RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 C1orf228Q6PIY5 440 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 RALGPS2Q86X27 583 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 C1orf210Q8IVY1 113 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 UBR7Q8N806 425 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 LMO3Q8TAP4 145 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 CNOT6LQ96LI5 555 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 NT5C1BQ96P26 610 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 DUSP16Q9BY84 665 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 FBXO44Q9H4M3 255 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 PNPLA8Q9NP80 782 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 WNT6Q9Y6F9 365 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 MYO16Q9Y6X6 1858 aa19.56■□□□□ 0.72
TSPAN4-215ENST00000525334 MYO15AQ9UKN7 3530 aa19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 OTOL1A6NHN0 477 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 LEFTY2O00292 366 aa19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 ZDHHC11BP0C7U3 371 aa19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 RPS9P46781 194 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 PDGFRLQ15198 375 aa19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 SNX30Q5VWJ9 437 aa19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 ARHGAP17Q68EM7 881 aa19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 OSCP1Q8WVF1 389 aa19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 SPATA6Q9NWH7 488 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 DUS2Q9NX74 493 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 SMPD4Q9NXE4 827 aa19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 CPQQ9Y646 472 aa19.55■□□□□ 0.72
TSPAN4-215ENST00000525334 DMDP11532 3685 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 USP34Q70CQ2 3546 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 CACNA1IQ9P0X4 2223 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 COCHO43405 550 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 MBL2P11226 248 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 ACO1P21399 889 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 IFNAR2P48551 515 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 PGFP49763 221 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 TUBP50607 506 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 HECTD3Q5T447 861 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 PPM1KQ8N3J5 372 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 EHBP1Q8NDI1 1231 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 GPT2Q8TD30 523 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 KAT5Q92993 513 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 CCSER2Q9H7U1 834 aa19.54■□□□□ 0.72
TSPAN4-215ENST00000525334 CYP26A1O43174 497 aa19.53■□□□□ 0.72
TSPAN4-215ENST00000525334 CHRNB1P11230 501 aa19.53■□□□□ 0.72
TSPAN4-215ENST00000525334 PON2Q15165 354 aa19.53■□□□□ 0.72
TSPAN4-215ENST00000525334 EML3Q32P44 896 aa19.53■□□□□ 0.72
TSPAN4-215ENST00000525334 IRF2BP1Q8IU81 584 aa19.53■□□□□ 0.72
TSPAN4-215ENST00000525334 CREBRFQ8IUR6 639 aa19.53■□□□□ 0.72
TSPAN4-215ENST00000525334 ARHGEF19Q8IW93 802 aa19.53■□□□□ 0.72
TSPAN4-215ENST00000525334 CHFRQ96EP1 664 aa19.53■□□□□ 0.72
TSPAN4-215ENST00000525334 LMAN1LQ9HAT1 526 aa19.53■□□□□ 0.72
TSPAN4-215ENST00000525334 SCML2Q9UQR0 700 aa19.53■□□□□ 0.72
TSPAN4-215ENST00000525334 CD19P15391 556 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 KIF11P52732 1056 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 GOLGA7BQ2TAP0 167 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 SGO2Q562F6 1265 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 TMEM270Q6UE05 265 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 RRAGAQ7L523 313 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 TTC30AQ86WT1 665 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 MAML2Q8IZL2 1156 aaPredicted RBP19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 CPA6Q8N4T0 437 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 ATP2A3Q93084 1043 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 ZFRQ96KR1 1074 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 INTS2Q9H0H0 1204 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 LINC00597Q9H2U6 94 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 CHRDQ9H2X0 955 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 ECT2Q9H8V3 914 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 TLR8Q9NR97 1041 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 RBM12Q9NTZ6 932 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 CFAP97Q9P2B7 532 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 TSPAN16Q9UKR8 245 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 PCDHB4Q9Y5E5 795 aa19.52■□□□□ 0.72
TSPAN4-215ENST00000525334 GOLGA6L22H0YM25 854 aa19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 LAMTOR5O43504 91 aa19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 TLR5O60602 858 aa19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 SP9P0CG40 484 aa19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 GCNT1Q02742 428 aa19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 MTAPQ13126 283 aa19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 LRRC32Q14392 662 aa19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 TPD52L1Q16890 204 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 DDX42Q86XP3 938 aaKnown RBP eCLIP19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 ANKRD52Q8NB46 1076 aa19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 NMUR1Q9HB89 426 aa19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 OSER1Q9NX31 292 aa19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 DACH1Q9UI36 760 aa19.51■□□□□ 0.71
TSPAN4-215ENST00000525334 A0A1W2PQH9 124 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 SCAMP3O14828 347 aaKnown RBP19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 GFRA3O60609 400 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 VDRP11473 427 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 ERCC5P28715 1186 aaPredicted RBP19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 GJA4P35212 333 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 BCAT1P54687 386 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 CCDC186Q7Z3E2 898 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 PIGZQ86VD9 579 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 KIAA1958Q8N8K9 716 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 KREMEN1Q96MU8 473 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 IER2Q9BTL4 223 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 UBXN6Q9BZV1 441 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 NACA2Q9H009 215 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 THAP9Q9H5L6 903 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 CYLDQ9NQC7 956 aa19.5■□□□□ 0.71
TSPAN4-215ENST00000525334 USP3Q9Y6I4 520 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms