RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 PGFP49763 221 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 TUBP50607 506 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 BCAT1P54687 386 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 SLC8A3P57103 927 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 ZXDBP98169 803 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 PDE4CQ08493 712 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 BST2Q10589 180 aaKnown RBP13.66□□□□□ -0.22
CTSB-209ENST00000525315 STILQ15468 1287 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 GOLGA7BQ2TAP0 167 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 SKOR2Q2VWA4 1001 aaPredicted RBP13.66□□□□□ -0.22
CTSB-209ENST00000525315 YAF2Q8IY57 180 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 ZNF276Q8N554 614 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 KIAA1958Q8N8K9 716 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 SHC3Q92529 594 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 SHDQ96IW2 340 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 DDX23Q9BUQ8 820 aaKnown RBP13.66□□□□□ -0.22
CTSB-209ENST00000525315 VPS16Q9H269 839 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 ARHGEF3Q9NR81 526 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 TLR8Q9NR97 1041 aaKnown RBP13.66□□□□□ -0.22
CTSB-209ENST00000525315 THG1LQ9NWX6 298 aaKnown RBP13.66□□□□□ -0.22
CTSB-209ENST00000525315 TAB2Q9NYJ8 693 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 GMIPQ9P107 970 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 HESX1Q9UBX0 185 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 LIMA1Q9UHB6 759 aaKnown RBP13.66□□□□□ -0.22
CTSB-209ENST00000525315 ARHGAP26Q9UNA1 814 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTSB-209ENST00000525315 MYOFQ9NZM1 2061 aa13.66□□□□□ -0.22
CTSB-209ENST00000525315 SHISA7A6NL88 538 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 BECN2A8MW95 431 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 ABL1P00519 1130 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 CALCAP01258 141 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 CKMP06732 381 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 GLULP15104 373 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 AVPR2P30518 371 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 MLF2Q15773 248 aaPredicted RBP13.65□□□□□ -0.22
CTSB-209ENST00000525315 ZNF77Q15935 545 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 ARHGAP44Q17R89 818 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 HECTD3Q5T447 861 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 KLHDC7AQ5VTJ3 777 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 PM20D1Q6GTS8 502 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 ASTLQ6HA08 431 aaPredicted RBP13.65□□□□□ -0.22
CTSB-209ENST00000525315 CCDC186Q7Z3E2 898 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 PIGZQ86VD9 579 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 RIN3Q8TB24 985 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 UBA3Q8TBC4 463 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 SLC35F5Q8WV83 523 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 KCTD13Q8WZ19 329 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 FAM83CQ9BQN1 747 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 MFSD1Q9H3U5 465 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 GKN1Q9NS71 199 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 DNAJC12Q9UKB3 198 aa13.65□□□□□ -0.22
CTSB-209ENST00000525315 COL4A3Q01955 1670 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 SMTNL1A8MU46 457 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 TULP2O00295 520 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 FOXN3O00409 490 aaPredicted RBP13.64□□□□□ -0.23
CTSB-209ENST00000525315 COCHO43405 550 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 SETSIPP0DME0 302 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 KRT5P13647 590 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 BRD2P25440 801 aaKnown RBP13.64□□□□□ -0.23
CTSB-209ENST00000525315 PLA2G4AP47712 749 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 COPB1P53618 953 aaKnown RBP13.64□□□□□ -0.23
CTSB-209ENST00000525315 USP4Q13107 963 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 MEA1Q16626 185 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 CWF19L1Q69YN2 538 aaKnown RBP13.64□□□□□ -0.23
CTSB-209ENST00000525315 APTXQ7Z2E3 356 aaKnown RBP13.64□□□□□ -0.23
CTSB-209ENST00000525315 SCD5Q86SK9 330 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 SUGP1Q8IWZ8 645 aaKnown RBP13.64□□□□□ -0.23
CTSB-209ENST00000525315 DHX40Q8IX18 779 aaKnown RBP13.64□□□□□ -0.23
CTSB-209ENST00000525315 SCML4Q8N228 414 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 AOPEPQ8N6M6 819 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 SH3RF2Q8TEC5 729 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 ZNF606Q8WXB4 792 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 ZFYVE19Q96K21 471 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 NAA15Q9BXJ9 866 aaKnown RBP13.64□□□□□ -0.23
CTSB-209ENST00000525315 CCSER2Q9H7U1 834 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 TBC1D17Q9HA65 648 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 NMUR1Q9HB89 426 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 PLCB1Q9NQ66 1216 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 CYLDQ9NQC7 956 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 HEBP1Q9NRV9 189 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 OSER1Q9NX31 292 aa13.64□□□□□ -0.23
CTSB-209ENST00000525315 AJAP1Q9UKB5 411 aaPredicted RBP13.64□□□□□ -0.23
CTSB-209ENST00000525315 A0A1W2PQH9 124 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 KANSL1LA0AUZ9 987 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 SYCE3A1L190 88 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 LEFTY2O00292 366 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 PES1O00541 588 aaKnown RBP13.63□□□□□ -0.23
CTSB-209ENST00000525315 CYP26A1O43174 497 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 PI15O43692 258 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 GABBR2O75899 941 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 TPM2P07951 284 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 AOC1P19801 751 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 CDK11BP21127 795 aaKnown RBP13.63□□□□□ -0.23
CTSB-209ENST00000525315 CLCN1P35523 988 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 GPD2P43304 727 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 RPL34P49207 117 aaKnown RBP13.63□□□□□ -0.23
CTSB-209ENST00000525315 PSEN1P49768 467 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 ZNF165P49910 485 aa13.63□□□□□ -0.23
CTSB-209ENST00000525315 TKTL1P51854 596 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms