RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 GRIA2P42262 883 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 ATXN3P54252 364 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-202ENST00000524773 C1QBPQ07021 282 aaKnown RBP13.73□□□□□ -0.21
CAPN1-202ENST00000524773 DPYSL3Q14195 570 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 KLHL38Q2WGJ6 581 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 SFT2D3Q587I9 215 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 VWA5B1Q5TIE3 1220 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 TRMT10BQ6PF06 316 aaKnown RBP13.73□□□□□ -0.21
CAPN1-202ENST00000524773 USP37Q86T82 979 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 ZNF677Q86XU0 584 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 SLC26A7Q8TE54 656 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 TMEM174Q8WUU8 243 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 MTBPQ96DY7 904 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 DNAJC1Q96KC8 554 aaKnown RBP13.73□□□□□ -0.21
CAPN1-202ENST00000524773 ASCC2Q9H1I8 757 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-202ENST00000524773 NDE1Q9NXR1 346 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 STRIP2Q9ULQ0 834 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 PCDHGB4Q9UN71 923 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 FZD1Q9UP38 647 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 DRG1Q9Y295 367 aaKnown RBP13.73□□□□□ -0.21
CAPN1-202ENST00000524773 PCDHGB5Q9Y5G0 923 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 ANKRD33BA6NCL7 494 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 PEX10O60683 326 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 TOM1L1O75674 476 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 PGM3O95394 542 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 PRKCEQ02156 737 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 PTPN20Q4JDL3 420 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 TCHHL1Q5QJ38 904 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-202ENST00000524773 DARS2Q6PI48 645 aaKnown RBP13.72□□□□□ -0.21
CAPN1-202ENST00000524773 B4GALNT2Q8NHY0 566 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 NMD3Q96D46 503 aaKnown RBP13.72□□□□□ -0.21
CAPN1-202ENST00000524773 MOCOSQ96EN8 888 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 TCHPQ9BT92 498 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 FOXP3Q9BZS1 431 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 RAB6BQ9NRW1 208 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 HEY1Q9Y5J3 304 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 A0A0B4J269 797 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 IRF6O14896 467 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 ITM2AO43736 263 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 MSX2P35548 267 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-202ENST00000524773 DSG1Q02413 1049 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 BAATQ14032 418 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-202ENST00000524773 SH2D5Q6ZV89 423 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 FAF2Q96CS3 445 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 POLIQ9UNA4 740 aa13.72□□□□□ -0.21
CAPN1-202ENST00000524773 CAPN14A8MX76 684 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 DHRS4L1P0CG22 281 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 CRADDP78560 199 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 PSMD6Q15008 389 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 PPP6R3Q5H9R7 873 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-202ENST00000524773 CIAPIN1Q6FI81 312 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 ATG14Q6ZNE5 492 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 MPP5Q8N3R9 675 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 AGR3Q8TD06 166 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 PDCD2LQ9BRP1 358 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 MAGEB5Q9BZ81 275 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 CISHQ9NSE2 258 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 TBC1D22BQ9NU19 505 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 ZNF212Q9UDV6 495 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 PCDHA10Q9Y5I2 948 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 MAD1L1Q9Y6D9 718 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 AK5Q9Y6K8 562 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 IQANK1A0A1B0GTG1 560 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 STAM2O75886 525 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 KDELR1P24390 212 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 PEX2P28328 305 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 GRIA1P42261 906 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 AQP4P55087 323 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 SLC25A11Q02978 314 aaKnown RBP13.71□□□□□ -0.21
CAPN1-202ENST00000524773 DLG1Q12959 904 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 SATL1Q86VE3 508 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 NUDCD3Q8IVD9 361 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 SLC44A1Q8WWI5 657 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 EZH1Q92800 747 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-202ENST00000524773 E2F7Q96AV8 911 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 PPP1R36Q96LQ0 422 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 CLIC5Q9NZA1 410 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 CNTN3Q9P232 1028 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 PLA2G4CQ9UP65 541 aa13.71□□□□□ -0.21
CAPN1-202ENST00000524773 SPECC1L-ADORA2AF8WAN1 911 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 H7C0C1 242 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 I3L4J1 428 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 CIB2O75838 187 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 APRTP07741 180 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 CSH1P0DML2 217 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 CSH2P0DML3 217 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 KRT3P12035 628 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 PTGER2P43116 358 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 ATP5OP48047 213 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 CMPK2Q5EBM0 449 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 DRICH1Q6PGQ1 229 aaPredicted RBP13.71□□□□□ -0.22
CAPN1-202ENST00000524773 PAOXQ6QHF9 649 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 RASSF3Q86WH2 238 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 LARGE2Q8N3Y3 721 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 SAMD3Q8N6K7 520 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 ZNF398Q8TD17 642 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 ETNK2Q9NVF9 386 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 ADAMTS6Q9UKP5 1117 aa13.71□□□□□ -0.22
CAPN1-202ENST00000524773 TCRBV5S1A1TA0A578 114 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 DNAJC6O75061 913 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms