RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 TNRC6BQ9UPQ9 1833 aaKnown RBP13.57□□□□□ -0.24
SF3B2-203ENST00000524627 ZFYVE26Q68DK2 2539 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 CACNA1EQ15878 2313 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 MYO18AQ92614 2054 aaKnown RBP13.56□□□□□ -0.24
SF3B2-203ENST00000524627 TMEM8BA6NDV4 472 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.56□□□□□ -0.24
SF3B2-203ENST00000524627 CLDN5O00501 218 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 HYAL3O43820 417 aaPredicted RBP13.56□□□□□ -0.24
SF3B2-203ENST00000524627 CFIP05156 583 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 PTPN1P18031 435 aaKnown RBP13.56□□□□□ -0.24
SF3B2-203ENST00000524627 ITPKAP23677 461 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 MAP7D1Q3KQU3 841 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 LY6G5CQ5SRR4 150 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 LYSMD4Q5XG99 296 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 STXBP4Q6ZWJ1 553 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 PDILTQ8N807 584 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 NAT16Q8N8M0 369 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 RDH13Q8NBN7 331 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 FBXO32Q969P5 355 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 ELOVL4Q9GZR5 314 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 SLC32A1Q9H598 525 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 FSCN3Q9NQT6 498 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 TBC1D14Q9P2M4 693 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 ATRXP46100 2492 aa13.56□□□□□ -0.24
SF3B2-203ENST00000524627 A0A0A0MRY4 1105 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 TBC1D3BA6NDS4 549 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 COCHO43405 550 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 TACC1O75410 805 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 CST3P01034 146 aaPredicted RBP13.55□□□□□ -0.24
SF3B2-203ENST00000524627 TNNI1P19237 187 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 YWHAQP27348 245 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 HOXD13P35453 343 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 TNFRSF4P43489 277 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 TNNC1P63316 161 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 BYSLQ13895 437 aaKnown RBP13.55□□□□□ -0.24
SF3B2-203ENST00000524627 WDR72Q3MJ13 1102 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 SLC23A3Q6PIS1 610 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 NUP93Q8N1F7 819 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 DEFB119Q8N690 84 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 ZCCHC14Q8WYQ9 949 aaKnown RBP13.55□□□□□ -0.24
SF3B2-203ENST00000524627 CCDC127Q96BQ5 260 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 B3GNT5Q9BYG0 378 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 KIAA1586Q9HCI6 787 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 PCNX2A6NKB5 2137 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 DMXL2Q8TDJ6 3036 aa13.55□□□□□ -0.24
SF3B2-203ENST00000524627 PLXND1Q9Y4D7 1925 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 BAHCC1Q9P281 2608 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 SPAARA0A1B0GVQ0 90 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 E2F8A0AVK6 867 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 SRRM3A6NNA2 597 aaPredicted RBP13.54□□□□□ -0.24
SF3B2-203ENST00000524627 A8MXQ7 604 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 PDCP20941 246 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 DPP6P42658 865 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 ATXN3P54252 364 aaPredicted RBP13.54□□□□□ -0.24
SF3B2-203ENST00000524627 SIM1P81133 766 aaPredicted RBP13.54□□□□□ -0.24
SF3B2-203ENST00000524627 RPL6Q02878 288 aaKnown RBP13.54□□□□□ -0.24
SF3B2-203ENST00000524627 GAD2Q05329 585 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 SNRNP35Q16560 246 aaKnown RBP13.54□□□□□ -0.24
SF3B2-203ENST00000524627 SPDYCQ5MJ68 293 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 BTBD8Q5XKL5 378 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 PHTF2Q8N3S3 785 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 ZNF513Q8N8E2 541 aaPredicted RBP13.54□□□□□ -0.24
SF3B2-203ENST00000524627 B3GALNT2Q8NCR0 500 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 ZFRQ96KR1 1074 aaKnown RBP13.54□□□□□ -0.24
SF3B2-203ENST00000524627 CGRRF1Q99675 332 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 GTPBP2Q9BX10 602 aaKnown RBP13.54□□□□□ -0.24
SF3B2-203ENST00000524627 UPF2Q9HAU5 1272 aaKnown RBP13.54□□□□□ -0.24
SF3B2-203ENST00000524627 NXF1Q9UBU9 619 aaKnown RBP13.54□□□□□ -0.24
SF3B2-203ENST00000524627 CHORDC1Q9UHD1 332 aaPredicted RBP13.54□□□□□ -0.24
SF3B2-203ENST00000524627 PILRBQ9UKJ0 227 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 SH3BP1Q9Y3L3 701 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 ADAMTS9Q9P2N4 1935 aa13.54□□□□□ -0.24
SF3B2-203ENST00000524627 FREM2Q5SZK8 3169 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 CLIC2O15247 247 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 EIF3DO15371 548 aaKnown RBP eCLIP13.53□□□□□ -0.24
SF3B2-203ENST00000524627 AP5Z1O43299 807 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 RTN3O95197 1032 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-203ENST00000524627 IRF1P10914 325 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 HOXB3P14651 431 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-203ENST00000524627 WASP42768 502 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 CYP2J2P51589 502 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 MYL6P60660 151 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 CYP24A1Q07973 514 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 SEMA3BQ13214 749 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 TRPC3Q13507 836 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 COL9A2Q14055 689 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-203ENST00000524627 PSMD6Q15008 389 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 ANO4Q32M45 955 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 C10orf76Q5T2E6 689 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 HECTD3Q5T447 861 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 TRMT11Q7Z4G4 463 aaKnown RBP13.53□□□□□ -0.24
SF3B2-203ENST00000524627 PIP4P1Q86T03 277 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 BBS7Q8IWZ6 715 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 ETFBKMTQ8IXQ9 262 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 HDDC3Q8N4P3 179 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 PDZD8Q8NEN9 1154 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 SCAMP5Q8TAC9 235 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 OVCA2Q8WZ82 227 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 OTUB2Q96DC9 234 aa13.53□□□□□ -0.24
SF3B2-203ENST00000524627 USP28Q96RU2 1077 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms