RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 TMEM176AQ96HP8 235 aa20.24■□□□□ 0.83
FBXO28-205ENST00000523990 SRRTQ9BXP5 876 aaKnown RBP20.24■□□□□ 0.83
FBXO28-205ENST00000523990 GMIPQ9P107 970 aa20.24■□□□□ 0.83
FBXO28-205ENST00000523990 RWDD2AQ9UIY3 292 aa20.24■□□□□ 0.83
FBXO28-205ENST00000523990 ZFHX2Q9C0A1 2572 aaPredicted RBP20.23■□□□□ 0.83
FBXO28-205ENST00000523990 PROB1E7EW31 1015 aa20.23■□□□□ 0.83
FBXO28-205ENST00000523990 P4HA2O15460 535 aa20.23■□□□□ 0.83
FBXO28-205ENST00000523990 UBR7Q8N806 425 aa20.23■□□□□ 0.83
FBXO28-205ENST00000523990 MED15Q96RN5 788 aa20.23■□□□□ 0.83
FBXO28-205ENST00000523990 FBXO44Q9H4M3 255 aa20.23■□□□□ 0.83
FBXO28-205ENST00000523990 LMAN1LQ9HAT1 526 aa20.23■□□□□ 0.83
FBXO28-205ENST00000523990 DUS2Q9NX74 493 aaKnown RBP20.23■□□□□ 0.83
FBXO28-205ENST00000523990 CHORDC1Q9UHD1 332 aaPredicted RBP20.23■□□□□ 0.83
FBXO28-205ENST00000523990 CPQQ9Y646 472 aa20.23■□□□□ 0.83
FBXO28-205ENST00000523990 WNT6Q9Y6F9 365 aa20.23■□□□□ 0.83
FBXO28-205ENST00000523990 MYOFQ9NZM1 2061 aa20.23■□□□□ 0.83
FBXO28-205ENST00000523990 LEFTY2O00292 366 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 TBXAS1P24557 533 aaPredicted RBP20.22■□□□□ 0.83
FBXO28-205ENST00000523990 IFNAR2P48551 515 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 TUBP50607 506 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 LRMPQ12912 555 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 MTAPQ13126 283 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 PON2Q15165 354 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 EML3Q32P44 896 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 LMO3Q8TAP4 145 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 JAKMIP2Q96AA8 810 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 HEXIM2Q96MH2 286 aaKnown RBP20.22■□□□□ 0.83
FBXO28-205ENST00000523990 IER2Q9BTL4 223 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 DUSP16Q9BY84 665 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 LMBRD1Q9NUN5 540 aa20.22■□□□□ 0.83
FBXO28-205ENST00000523990 COCHO43405 550 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 LAMTOR5O43504 91 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 SP9P0CG40 484 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 PGFP49763 221 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 YWHAEP62258 255 aaKnown RBP20.21■□□□□ 0.83
FBXO28-205ENST00000523990 KCNH2Q12809 1159 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 CCINQ13939 588 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 LRRC32Q14392 662 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 HECTD3Q5T447 861 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 ARHGAP17Q68EM7 881 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 CPA6Q8N4T0 437 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 MLKLQ8NB16 471 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 ATP2A3Q93084 1043 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 ZFRQ96KR1 1074 aaKnown RBP20.21■□□□□ 0.83
FBXO28-205ENST00000523990 NT5C1BQ96P26 610 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 NUP62CLQ9H1M0 184 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 CCSER2Q9H7U1 834 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 ECT2Q9H8V3 914 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 PRMT8Q9NR22 394 aaPredicted RBP20.21■□□□□ 0.83
FBXO28-205ENST00000523990 SMPD4Q9NXE4 827 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 FBXO4Q9UKT5 387 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 SCML2Q9UQR0 700 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.21■□□□□ 0.83
FBXO28-205ENST00000523990 ATG2BQ96BY7 2078 aa20.21■□□□□ 0.83
FBXO28-205ENST00000523990 CYP26A1O43174 497 aa20.2■□□□□ 0.82
FBXO28-205ENST00000523990 FGFR1OPO95684 399 aaKnown RBP20.2■□□□□ 0.82
FBXO28-205ENST00000523990 AFPP02771 609 aaKnown RBP20.2■□□□□ 0.82
FBXO28-205ENST00000523990 CCDC192P0DO97 292 aa20.2■□□□□ 0.82
FBXO28-205ENST00000523990 MBL2P11226 248 aaPredicted RBP20.2■□□□□ 0.82
FBXO28-205ENST00000523990 ACO1P21399 889 aaKnown RBP20.2■□□□□ 0.82
FBXO28-205ENST00000523990 CETN1Q12798 172 aa20.2■□□□□ 0.82
FBXO28-205ENST00000523990 GAS6Q14393 721 aa20.2■□□□□ 0.82
FBXO28-205ENST00000523990 KIAA1958Q8N8K9 716 aa20.2■□□□□ 0.82
FBXO28-205ENST00000523990 TLR8Q9NR97 1041 aaKnown RBP20.2■□□□□ 0.82
FBXO28-205ENST00000523990 RBM12Q9NTZ6 932 aaKnown RBP20.2■□□□□ 0.82
FBXO28-205ENST00000523990 GJA4P35212 333 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 KIF11P52732 1056 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 ZNF528Q3MIS6 628 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 MAMSTRQ6ZN01 415 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 PPM1KQ8N3J5 372 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 CNOT6LQ96LI5 555 aaKnown RBP20.19■□□□□ 0.82
FBXO28-205ENST00000523990 TLR5O60602 858 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 DPCR1Q3MIW9 517 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 TMEM196Q5HYL7 178 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 DGKKQ5KSL6 1271 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 Q6ZS52 159 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 TTC30AQ86WT1 665 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 DDX42Q86XP3 938 aaKnown RBP eCLIP20.19■□□□□ 0.82
FBXO28-205ENST00000523990 KAT5Q92993 513 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 LINC00597Q9H2U6 94 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 CYLDQ9NQC7 956 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 OSER1Q9NX31 292 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 CFAP97Q9P2B7 532 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 TSPAN16Q9UKR8 245 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 USP3Q9Y6I4 520 aa20.19■□□□□ 0.82
FBXO28-205ENST00000523990 TRDMT1O14717 391 aaKnown RBP20.18■□□□□ 0.82
FBXO28-205ENST00000523990 NFATC1O95644 943 aa20.18■□□□□ 0.82
FBXO28-205ENST00000523990 AMPD2Q01433 879 aa20.18■□□□□ 0.82
FBXO28-205ENST00000523990 GCNT1Q02742 428 aa20.18■□□□□ 0.82
FBXO28-205ENST00000523990 SGO2Q562F6 1265 aa20.18■□□□□ 0.82
FBXO28-205ENST00000523990 CCDC186Q7Z3E2 898 aa20.18■□□□□ 0.82
FBXO28-205ENST00000523990 ARHGEF19Q8IW93 802 aa20.18■□□□□ 0.82
FBXO28-205ENST00000523990 ANKRD52Q8NB46 1076 aa20.18■□□□□ 0.82
FBXO28-205ENST00000523990 GBP4Q96PP9 640 aa20.18■□□□□ 0.82
FBXO28-205ENST00000523990 NMUR1Q9HB89 426 aa20.18■□□□□ 0.82
FBXO28-205ENST00000523990 R4GN57 208 aa20.18■□□□□ 0.82
FBXO28-205ENST00000523990 ZNF292O60281 2723 aa20.17■□□□□ 0.82
FBXO28-205ENST00000523990 DMXL1Q9Y485 3027 aa20.17■□□□□ 0.82
FBXO28-205ENST00000523990 SCAMP3O14828 347 aaKnown RBP20.17■□□□□ 0.82
FBXO28-205ENST00000523990 CSTF1Q05048 431 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms