RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 OVOS1Q6IE37 1185 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 GPRIN1Q7Z2K8 1008 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 SPATA18Q8TC71 538 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 KCTD13Q8WZ19 329 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 KCNK16Q96T55 309 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 PKMYT1Q99640 499 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 ACBD6Q9BR61 282 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 C11orf84Q9BUA3 381 aaPredicted RBP21.77■■□□□ 1.08
SQLE-206ENST00000523430 PPP1R12CQ9BZL4 782 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 UBXN6Q9BZV1 441 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 HIPK3Q9H422 1215 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 TMLHEQ9NVH6 421 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 GRHL1Q9NZI5 618 aa21.77■■□□□ 1.08
SQLE-206ENST00000523430 PRG3Q9Y2Y8 225 aaPredicted RBP21.77■■□□□ 1.08
SQLE-206ENST00000523430 H3BQF6 201 aa21.76■■□□□ 1.07
SQLE-206ENST00000523430 PRPSAP2O60256 369 aa21.76■■□□□ 1.07
SQLE-206ENST00000523430 CCL23P55773 120 aa21.76■■□□□ 1.07
SQLE-206ENST00000523430 HDAC4P56524 1084 aa21.76■■□□□ 1.07
SQLE-206ENST00000523430 PPP1R7Q15435 360 aa21.76■■□□□ 1.07
SQLE-206ENST00000523430 TAZQ16635 292 aa21.76■■□□□ 1.07
SQLE-206ENST00000523430 SLC39A5Q6ZMH5 540 aa21.76■■□□□ 1.07
SQLE-206ENST00000523430 KCTD6Q8NC69 237 aa21.76■■□□□ 1.07
SQLE-206ENST00000523430 CMASQ8NFW8 434 aaPredicted RBP21.76■■□□□ 1.07
SQLE-206ENST00000523430 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.76■■□□□ 1.07
SQLE-206ENST00000523430 LRRC4Q9HBW1 653 aa21.76■■□□□ 1.07
SQLE-206ENST00000523430 CAPN15O75808 1086 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 PAX3P23760 479 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 PTPN9P43378 593 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 ATXN1P54253 815 aaKnown RBP21.75■■□□□ 1.07
SQLE-206ENST00000523430 DYNLT1P63172 113 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 FAAP100Q0VG06 881 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 SCYL2Q6P3W7 929 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 ZDHHC24Q6UX98 284 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 ANKRD33Q7Z3H0 272 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 SIX6OS1Q8N1H7 587 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 DIS3LQ8TF46 1054 aaKnown RBP21.75■■□□□ 1.07
SQLE-206ENST00000523430 SMARCD1Q96GM5 515 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 CRISPLD2Q9H0B8 497 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 ELAC1Q9H777 363 aaKnown RBP21.75■■□□□ 1.07
SQLE-206ENST00000523430 HOMER3Q9NSC5 361 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 ZDHHC18Q9NUE0 388 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 HCSTQ9UBK5 93 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 PCDHB8Q9UN66 801 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 LIASO43766 372 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 TKTL1P51854 596 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 MRPS5P82675 430 aaKnown RBP21.75■■□□□ 1.07
SQLE-206ENST00000523430 FAM171BQ6P995 826 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 ARCQ7LC44 396 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 FAM149B1Q96BN6 582 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 GPATCH2LQ9NWQ4 482 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 CALCOCO1Q9P1Z2 691 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 KANSL3Q9P2N6 904 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 PCDHB7Q9Y5E2 793 aa21.75■■□□□ 1.07
SQLE-206ENST00000523430 TMEM189-UBE2V1I3L0A0 370 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 HSF2BPO75031 334 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 COL6A1P12109 1028 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 TYMPP19971 482 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 EFHC1Q5JVL4 640 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 CTU1Q7Z7A3 348 aaKnown RBP21.74■■□□□ 1.07
SQLE-206ENST00000523430 LRRTM3Q86VH5 581 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 ABI1Q8IZP0 508 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 APBB2Q92870 758 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 CASD1Q96PB1 797 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 CALN1Q9BXU9 219 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 DNPEPQ9ULA0 475 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 TET1Q8NFU7 2136 aa21.74■■□□□ 1.07
SQLE-206ENST00000523430 HHLA1C9JL84 531 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 DAB1O75553 588 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 ARSEP51690 589 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 DRG2P55039 364 aaKnown RBP21.73■■□□□ 1.07
SQLE-206ENST00000523430 CDH6P55285 790 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 BCAR1P56945 870 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 MMRN1Q13201 1228 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 TRIP13Q15645 432 aaPredicted RBP21.73■■□□□ 1.07
SQLE-206ENST00000523430 ZC3H12AQ5D1E8 599 aaKnown RBP21.73■■□□□ 1.07
SQLE-206ENST00000523430 NLRC5Q86WI3 1866 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 DEFB106AQ8N104 65 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 MREGQ8N565 214 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 GRK7Q8WTQ7 553 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 FAM193BQ96PV7 902 aaPredicted RBP21.73■■□□□ 1.07
SQLE-206ENST00000523430 TBCBQ99426 244 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 DDX23Q9BUQ8 820 aaKnown RBP21.73■■□□□ 1.07
SQLE-206ENST00000523430 SNRNP25Q9BV90 132 aaKnown RBP21.73■■□□□ 1.07
SQLE-206ENST00000523430 ULBP1Q9BZM6 244 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.73■■□□□ 1.07
SQLE-206ENST00000523430 SAE1Q9UBE0 346 aaPredicted RBP21.73■■□□□ 1.07
SQLE-206ENST00000523430 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.73■■□□□ 1.07
SQLE-206ENST00000523430 CST8O60676 142 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 BDNFP23560 247 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 OAS2P29728 719 aaKnown RBP21.73■■□□□ 1.07
SQLE-206ENST00000523430 CYP2C18P33260 490 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 PLTPP55058 493 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 TLE2Q04725 743 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 YWHAHQ04917 246 aaPredicted RBP21.73■■□□□ 1.07
SQLE-206ENST00000523430 PTK6Q13882 451 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 CA9Q16790 459 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 OTUD1Q5VV17 481 aaPredicted RBP21.73■■□□□ 1.07
SQLE-206ENST00000523430 HFE2Q6ZVN8 426 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 ATL2Q8NHH9 583 aa21.73■■□□□ 1.07
SQLE-206ENST00000523430 CENPIQ92674 756 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms