RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 GAD2Q05329 585 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 FAM102AQ5T9C2 384 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-212ENST00000523387 C16orf46Q6P387 395 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 KBTBD2Q8IY47 623 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 EMC1Q8N766 993 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 ZNF513Q8N8E2 541 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-212ENST00000523387 PHC3Q8NDX5 983 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 ZNF606Q8WXB4 792 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 CPT1BQ92523 772 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 FAM136AQ96C01 138 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 VCPIP1Q96JH7 1222 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 ASNSD1Q9NWL6 643 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 ADAMTS7Q9UKP4 1686 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.37□□□□□ -0.91
CSMD1-212ENST00000523387 GIPC1O14908 333 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 MED7O43513 233 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 DCXO43602 365 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 TBC1D12O60347 775 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 FAM58BPP0C7Q3 252 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 SERPINB5P36952 375 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 ALDH1A3P47895 512 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 SERPINB9P50453 376 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 SESN2P58004 480 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-212ENST00000523387 GPX6P59796 221 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 TCEAL1Q15170 157 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 SEZ6Q53EL9 994 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 TMEM63BQ5T3F8 832 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 SLFN12LQ6IEE8 588 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 C16orf87Q6PH81 154 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 TSHZ1Q6ZSZ6 1077 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 POLNQ7Z5Q5 900 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 MYLK4Q86YV6 388 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-212ENST00000523387 CCDC33Q8N5R6 958 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 RNF148Q8N7C7 305 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 PLEKHO2Q8TD55 490 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 THAP11Q96EK4 314 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 ZFRQ96KR1 1074 aaKnown RBP9.37□□□□□ -0.91
CSMD1-212ENST00000523387 EFHD1Q9BUP0 239 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 TLE6Q9H808 572 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 LZTS1Q9Y250 596 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 OR6B1O95007 311 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 SERPINA6P08185 405 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 PHEXP78562 749 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 MRPS22P82650 360 aaKnown RBP9.37□□□□□ -0.91
CSMD1-212ENST00000523387 GTF2BQ00403 316 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 KRT76Q01546 638 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 PRR5LQ6MZQ0 368 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 SWSAP1Q6NVH7 229 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 FAM160B2Q86V87 743 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 CHSY1Q86X52 802 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 SLC7A3Q8WY07 619 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 SKA1Q96BD8 255 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 TMA16Q96EY4 203 aaKnown RBP9.37□□□□□ -0.91
CSMD1-212ENST00000523387 GMCL1Q96IK5 515 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 IGKV6D-41A0A0C4DH26 115 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 PIK3R2O00459 728 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 AVILO75366 819 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 PSMC3P17980 439 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 STIP1P31948 543 aaKnown RBP9.37□□□□□ -0.91
CSMD1-212ENST00000523387 RAP1GDS1P52306 607 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 PTP4A2Q12974 167 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 ITGA9Q13797 1035 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 DPYSL3Q14195 570 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 ACAP1Q15027 740 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 PRKD1Q15139 912 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-212ENST00000523387 ZNF699Q32M78 642 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 RALGPS1Q5JS13 557 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 TREML1Q86YW5 311 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 RELL1Q8IUW5 271 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 DAW1Q8N136 415 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 MAML3Q96JK9 1138 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 RMDN3Q96TC7 470 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 ZNF395Q9H8N7 513 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-212ENST00000523387 FBXO28Q9NVF7 368 aa9.37□□□□□ -0.91
CSMD1-212ENST00000523387 WRAP73Q9P2S5 460 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-212ENST00000523387 EXTL3O43909 919 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 LDHAP00338 332 aaKnown RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 UNGP13051 313 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 SLC1A6P48664 564 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 TPD52P55327 224 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 DLG1Q12959 904 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 C16orf72Q14CZ0 275 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 LPCAT2Q7L5N7 544 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 UNC45BQ8IWX7 931 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 C12orf56Q8IXR9 622 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 PIWIL2Q8TC59 973 aaKnown RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 FAM172AQ8WUF8 416 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 NRDE2Q9H7Z3 1164 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 COPS7BQ9H9Q2 264 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 A0A0B4J269 797 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 GOLGA8QA0A0J9YX86 632 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 GOLGA8OA6NCC3 632 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 GOLGA8NF8WBI6 632 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 LYPLA1O75608 230 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 DLDP09622 509 aaKnown RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 MCF2P10911 925 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 RFC1P35251 1148 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-212ENST00000523387 C16orf89Q6UX73 402 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 MON1BQ7L1V2 547 aa9.36□□□□□ -0.91
CSMD1-212ENST00000523387 HPS6Q86YV9 775 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms