RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 HFE2Q6ZVN8 426 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 ANKS3Q6ZW76 656 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 SLC26A9Q7LBE3 791 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 ZDHHC17Q8IUH5 632 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 SCN4BQ8IWT1 228 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 RHOT1Q8IXI2 618 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 RASGEF1CQ8N431 466 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 TTC9BQ8N6N2 239 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 ARFGAP1Q8N6T3 406 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 NIPA2Q8N8Q9 360 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 STKLD1Q8NE28 680 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 FNIP1Q8TF40 1166 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 RIN2Q8WYP3 895 aaPredicted RBP7.05□□□□□ -1.28
PVT1-217ENST00000523190 HERVK_113Q902F9 699 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 TSC1Q92574 1164 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 GOLGA1Q92805 767 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 KHSRPQ92945 711 aaKnown RBP eCLIP7.05□□□□□ -1.286e-7■■■■■ 34.9
PVT1-217ENST00000523190 FAM149B1Q96BN6 582 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 TMEM169Q96HH4 297 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 RNPC3Q96LT9 517 aaKnown RBP7.05□□□□□ -1.28
PVT1-217ENST00000523190 CFAP57Q96MR6 1250 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 PGLYRP2Q96PD5 576 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 ZBED2Q9BTP6 218 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 TTPALQ9BTX7 342 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 HERC2P3Q9BVR0 1158 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 TMEM121BQ9BXQ6 578 aaPredicted RBP7.05□□□□□ -1.28
PVT1-217ENST00000523190 RAB6CQ9H0N0 254 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 CARD9Q9H257 536 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 KLHL11Q9NVR0 708 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 LCMT1Q9UIC8 334 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 PCDHB5Q9Y5E4 795 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 PCDHA3Q9Y5H8 950 aa7.05□□□□□ -1.28
PVT1-217ENST00000523190 PTPRDP23468 1912 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 C2orf72A6NCS6 295 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 EFCAB8A8MWE9 144 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 PI4K2BG5E9Z4 385 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 PGRMC1O00264 195 aaKnown RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 ADAM12O43184 909 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 CTIFO43310 598 aaKnown RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 HSF2BPO75031 334 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 LRCH4O75427 683 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 RNF8O76064 485 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 FBXO21O94952 628 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 VNN2O95498 520 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 SOD2P04179 222 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 KRT1P04264 644 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 USP17L7P0C7H9 530 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 PYGMP11217 842 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 PDGFRAP16234 1089 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 RPL17P18621 184 aaKnown RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 TFE3P19532 575 aaPredicted RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 SDC4P31431 198 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 GLUD2P49448 558 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 SULT1E1P49888 294 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 ZNF143P52747 638 aaPredicted RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 SLC5A3P53794 718 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 PITX1P78337 314 aaPredicted RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 ATP11AP98196 1134 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 ROR1Q01973 937 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 SLC25A11Q02978 314 aaKnown RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 LLGL1Q15334 1064 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 ELF2Q15723 593 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 LONRF2Q1L5Z9 754 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 ERCC6LQ2NKX8 1250 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 CCDC14Q49A88 953 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 CFAP221Q4G0U5 840 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 ATP13A4Q4VNC1 1196 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 RAB41Q5JT25 222 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 EFHC1Q5JVL4 640 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 ZFYVE27Q5T4F4 411 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 KIAA1841Q6NSI8 718 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 RNF19BQ6ZMZ0 732 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 RSRC2Q7L4I2 434 aaKnown RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 ZNF572Q7Z3I7 529 aaPredicted RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 ADAT2Q7Z6V5 191 aaKnown RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 HERC6Q8IVU3 1022 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 DEFB106AQ8N104 65 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 FIBCD1Q8N539 461 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 ATAD1Q8NBU5 361 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 NOA1Q8NC60 698 aaKnown RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 SPATA4Q8NEY3 305 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 ACTRT1Q8TDG2 376 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 FAM172AQ8WUF8 416 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 PIK3R5Q8WYR1 880 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 DPF3Q92784 378 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 ACSF2Q96CM8 615 aaPredicted RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 ABHD8Q96I13 439 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 FUBP3Q96I24 572 aaKnown RBP eCLIP7.04□□□□□ -1.289e-9■■■■■ 53.3
PVT1-217ENST00000523190 PEBP4Q96S96 227 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 SLC9A7Q96T83 725 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 TBCBQ99426 244 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 LBHD1Q9BQE6 289 aaPredicted RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 CNPY3Q9BT09 278 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 UBXN6Q9BZV1 441 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 EPC1Q9H2F5 836 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 CRISPLD1Q9H336 500 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 ZWILCHQ9H900 591 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 NGRNQ9NPE2 291 aaKnown RBP7.04□□□□□ -1.28
PVT1-217ENST00000523190 CNGB3Q9NQW8 809 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 CHST7Q9NS84 486 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms