RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FBXL5Q9UKA1 691 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 ZDHHC8Q9ULC8 765 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 DUSP12Q9UNI6 340 aa4.34□□□□□ -1.71
SKP1-209ENST00000522552 SYNJ2BP-COX16A0A087WUM0 186 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 KRT87PA6NCN2 255 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 PRSS29PA6NIE9 313 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 FAM90A20PA6NIJ5 464 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 TXNL1O43396 289 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 KINO60870 393 aaKnown RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 NTRK1P04629 796 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 CD1AP06126 327 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 CYP21A2P08686 494 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 TMIGD3P0DMS9 266 aaPredicted RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 PFKLP17858 780 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 DDCP20711 480 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 THBS2P35442 1172 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 TCF7P36402 384 aaPredicted RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 SREBF1P36956 1147 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 PREPP48147 710 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 UCP3P55916 312 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 PER3P56645 1201 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 NOMO3P69849 1222 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 KLHL30Q0D2K2 578 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 LRRC74AQ0VAA2 488 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 DBPQ10586 325 aaPredicted RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 TNFAIP1Q13829 316 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 SLC29A2Q14542 456 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 IRF3Q14653 427 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 GRM4Q14833 912 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 SF3B3Q15393 1217 aaKnown RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 MED22Q15528 200 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 ZNF484Q5JVG2 852 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 ANKRD34AQ69YU3 496 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 CAVIN1Q6NZI2 390 aaKnown RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 SLC30A9Q6PML9 568 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 LRSAM1Q6UWE0 723 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 PLPPR4Q7Z2D5 763 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 LINC00346Q8IVM7 164 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 TRIM48Q8IWZ4 208 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 PQLC1Q8N2U9 271 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 DTWD1Q8N5C7 304 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 FBLIM1Q8WUP2 373 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 SEPT1Q8WYJ6 367 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 HSPH1Q92598 858 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 CYFIP2Q96F07 1278 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 SIPA1Q96FS4 1042 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 PPP1R13BQ96KQ4 1090 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 FCRL2Q96LA5 508 aaPredicted RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 MED15Q96RN5 788 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 ATP6V0BQ99437 205 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 AMNQ9BXJ7 453 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 TEX13BQ9BXU2 312 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 TRIM6Q9C030 488 aaPredicted RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 KLHL4Q9C0H6 718 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 TNMDQ9H2S6 317 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 MMADHCQ9H3L0 296 aaPredicted RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 SMARCAD1Q9H4L7 1026 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 THAP9Q9H5L6 903 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 VEZTQ9HBM0 779 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 PCDHB16Q9NRJ7 776 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 SIDT1Q9NXL6 827 aaKnown RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 SELENONQ9NZV5 590 aa4.33□□□□□ -1.72
SKP1-209ENST00000522552 AKAP7Q9P0M2 348 aaPredicted RBP4.33□□□□□ -1.72
SKP1-209ENST00000522552 A0A1W2PR48 441 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 TSPAN4O14817 238 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 TNFSF14O43557 240 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 ZBTB14O43829 449 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PHF2O75151 1096 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PPFIA2O75334 1257 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 GPR32O75388 356 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 SEC22BO75396 215 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 DNAJB5O75953 348 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 CAMTA2O94983 1202 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 UNC5CO95185 931 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 APBB3O95704 486 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 DLDP09622 509 aaKnown RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 RARGP13631 454 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PTPN2P17706 415 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 LAG3P18627 525 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PTGS1P23219 599 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 CASQ1P31415 396 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 ICAM3P32942 547 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 BSGP35613 385 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 MAGEA10P43363 369 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 HSD17B4P51659 736 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 SLC12A3P55017 1021 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 AKAP17AQ02040 695 aaKnown RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 MEF2AQ02078 507 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 DOC2BQ14184 412 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 LASP1Q14847 261 aaKnown RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 NAA25Q14CX7 972 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 C2orf76Q3KRA6 126 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 NRN1LQ496H8 165 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 ADALQ6DHV7 355 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PLAG1Q6DJT9 500 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 KDELC1Q6UW63 502 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 PET117Q6UWS5 81 aa4.32□□□□□ -1.72
SKP1-209ENST00000522552 FAM83HQ6ZRV2 1179 aaPredicted RBP4.32□□□□□ -1.72
SKP1-209ENST00000522552 ADGRA1Q86SQ6 560 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms