RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TMEM51Q9NW97 253 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 VPS9D1Q9Y2B5 631 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 UMODL1Q5DID0 1318 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 LRRIQ3A6PVS8 624 aaPredicted RBP16.77■□□□□ 0.28
USP42-207ENST00000521713 SPRP35270 261 aaPredicted RBP16.77■□□□□ 0.28
USP42-207ENST00000521713 DEFA1P59665 94 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 DEFA3P59666 94 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 LBRQ14739 615 aaKnown RBP16.77■□□□□ 0.28
USP42-207ENST00000521713 PCSK7Q16549 785 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 TRIM60Q495X7 471 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 MTMR9Q96QG7 549 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 SPDYE5A6NIY4 337 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 ANP32DO95626 131 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 FDFT1P37268 417 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 HADHAP40939 763 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 PLD1Q13393 1074 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 MDH1BQ5I0G3 518 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 HABP4Q5JVS0 413 aaKnown RBP16.77■□□□□ 0.27
USP42-207ENST00000521713 OLFML2BQ68BL8 750 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 SLFN11Q7Z7L1 901 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 USP38Q8NB14 1042 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 NCLNQ969V3 563 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 NSL1Q96IY1 281 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 ZSWIM1Q9BR11 485 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 PCDHAC2Q9Y5I4 1007 aa16.77■□□□□ 0.27
USP42-207ENST00000521713 CYP3A7-CYP3A51PA0A087WV96 503 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 F8VZ95 297 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 CYP3A7P24462 503 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 SCTRP47872 440 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 BEX3Q00994 111 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 MEI1Q5TIA1 1274 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 GOLPH3Q9H4A6 298 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 TRIM45Q9H8W5 580 aaPredicted RBP16.76■□□□□ 0.27
USP42-207ENST00000521713 LATS2Q9NRM7 1088 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 PRDM4Q9UKN5 801 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 PKP3Q9Y446 797 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 TIGD7Q6NT04 549 aaPredicted RBP16.76■□□□□ 0.27
USP42-207ENST00000521713 SLC13A5Q86YT5 568 aaPredicted RBP16.76■□□□□ 0.27
USP42-207ENST00000521713 RMDN2Q96LZ7 410 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 SERPINB12Q96P63 405 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 KCNMB3Q9NPA1 279 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 DOLKQ9UPQ8 538 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 TMEM120BA0PK00 339 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 HNRNPRO43390 633 aaKnown RBP16.76■□□□□ 0.27
USP42-207ENST00000521713 PSMD10O75832 226 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 ENO1P06733 434 aaKnown RBP16.76■□□□□ 0.27
USP42-207ENST00000521713 FNTAP49354 379 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 GEMP55040 296 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 GCNT1Q02742 428 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 ORC1Q13415 861 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 IKBKEQ14164 716 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 TRIP10Q15642 601 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 CDKAL1Q5VV42 579 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 HASPINQ8TF76 798 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 NAF1Q96HR8 494 aaKnown RBP16.76■□□□□ 0.27
USP42-207ENST00000521713 DACH2Q96NX9 599 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 BCL9LQ86UU0 1499 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 MEIS2O14770 477 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 DSG1Q02413 1049 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 PTK6Q13882 451 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 PTK2BQ14289 1009 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 PLPPR4Q7Z2D5 763 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 CCDC60Q8IWA6 550 aaPredicted RBP16.76■□□□□ 0.27
USP42-207ENST00000521713 TRIM51Q9BSJ1 452 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 ASPSCR1Q9BZE9 553 aa16.76■□□□□ 0.27
USP42-207ENST00000521713 A0A1B0GW55 424 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 DUX4L2P0CJ85 424 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 DUX4L3P0CJ86 424 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 DUX4L4P0CJ87 422 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 DUX4L5P0CJ88 424 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 DUX4L6P0CJ89 424 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 DUX4L7P0CJ90 424 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 CXCL17Q6UXB2 119 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 KIAA0895Q8NCT3 520 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 DCLRE1BQ9H816 532 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 TLR8Q9NR97 1041 aaKnown RBP16.75■□□□□ 0.27
USP42-207ENST00000521713 DUX4Q9UBX2 424 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 TRIM10Q9UDY6 481 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 IPPQ9Y573 584 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 SLC12A8A0AV02 714 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 RAD51CO43502 376 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 KRT16P08779 473 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 KDSRQ06136 332 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 USP10Q14694 798 aaKnown RBP16.75■□□□□ 0.27
USP42-207ENST00000521713 RNF217Q8TC41 542 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 EMILIN2Q9BXX0 1053 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 TTLL13PA6NNM8 815 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 SERPINI2O75830 405 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 ASS1P00966 412 aaKnown RBP16.75■□□□□ 0.27
USP42-207ENST00000521713 AKAP5P24588 427 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 ZNF200P98182 395 aaPredicted RBP16.75■□□□□ 0.27
USP42-207ENST00000521713 MCL1Q07820 350 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 PTRHD1Q6GMV3 140 aaKnown RBP16.75■□□□□ 0.27
USP42-207ENST00000521713 TERB1Q8NA31 727 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 FAM172AQ8WUF8 416 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 EME1Q96AY2 570 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 ATXN7L3BQ96GX2 97 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 ERP44Q9BS26 406 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 PAPOLBQ9NRJ5 636 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms