RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 CHFRQ96EP1 664 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 MED15Q96RN5 788 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 DUSP16Q9BY84 665 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 LINC00597Q9H2U6 94 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 CLSTN2Q9H4D0 955 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 RBM12Q9NTZ6 932 aaKnown RBP18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 GMIPQ9P107 970 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 CPQQ9Y646 472 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 GNA14O95837 355 aa18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 IFNAR2P48551 515 aa18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 MARSP56192 900 aaKnown RBP18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 EML3Q32P44 896 aa18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 HECTD3Q5T447 861 aa18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 LMO3Q8TAP4 145 aa18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 JAKMIP2Q96AA8 810 aa18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 FBXO44Q9H4M3 255 aa18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 ECT2Q9H8V3 914 aa18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 SMPD4Q9NXE4 827 aa18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 RWDD2AQ9UIY3 292 aa18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 FBXO4Q9UKT5 387 aa18.9■□□□□ 0.62
TRAPPC9-211ENST00000521700 P4HA2O15460 535 aa18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 COCHO43405 550 aa18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 MBL2P11226 248 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 CSTF1Q05048 431 aaKnown RBP18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 KCNH2Q12809 1159 aa18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 GAS6Q14393 721 aa18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 ARHGAP17Q68EM7 881 aa18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 MAMSTRQ6ZN01 415 aa18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 UBR7Q8N806 425 aa18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 CCSER2Q9H7U1 834 aa18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 PNPLA8Q9NP80 782 aa18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 R4GN57 208 aa18.89■□□□□ 0.61
TRAPPC9-211ENST00000521700 FGFR1OPO95684 399 aaKnown RBP18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 ACO1P21399 889 aaKnown RBP18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 GJA4P35212 333 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 TUBP50607 506 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 CCINQ13939 588 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 LRRC32Q14392 662 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 ZNF528Q3MIS6 628 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 DGKKQ5KSL6 1271 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 CPA6Q8N4T0 437 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 ATP2A3Q93084 1043 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 IER2Q9BTL4 223 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 FBRSL1Q9HCM7 1045 aaKnown RBP18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 LMBRD1Q9NUN5 540 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 CFAP97Q9P2B7 532 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 SCML2Q9UQR0 700 aa18.88■□□□□ 0.61
TRAPPC9-211ENST00000521700 TRDMT1O14717 391 aaKnown RBP18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 TBXAS1P24557 533 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 KIF11P52732 1056 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 YWHAEP62258 255 aaKnown RBP18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 AMPD2Q01433 879 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 CETN1Q12798 172 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 TMEM196Q5HYL7 178 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 NAIF1Q69YI7 327 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 TSSK4Q6SA08 328 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 Q6ZS52 159 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 ASCL5Q7RTU5 278 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 KIAA1958Q8N8K9 716 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 MLKLQ8NB16 471 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 EHBP1Q8NDI1 1231 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 ZFRQ96KR1 1074 aaKnown RBP18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 NT5C1BQ96P26 610 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 PRMT8Q9NR22 394 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 TLR8Q9NR97 1041 aaKnown RBP18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 OSER1Q9NX31 292 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 MYO15AQ9UKN7 3530 aa18.87■□□□□ 0.61
TRAPPC9-211ENST00000521700 ZFHX2Q9C0A1 2572 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 SCAMP3O14828 347 aaKnown RBP18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 CYP26A1O43174 497 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 TLR5O60602 858 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 GFRA3O60609 400 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 AFPP02771 609 aaKnown RBP18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 CCDC192P0DO97 292 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 GALK1P51570 392 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 FSTL4Q6MZW2 842 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 ADGRG2Q8IZP9 1017 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 ANKRD52Q8NB46 1076 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 KAT5Q92993 513 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 NKD2Q969F2 451 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 UBXN6Q9BZV1 441 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 NMUR1Q9HB89 426 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 USP3Q9Y6I4 520 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 FANCMQ8IYD8 2048 aa18.86■□□□□ 0.61
TRAPPC9-211ENST00000521700 DMDP11532 3685 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 PRR23AA6NEV1 266 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 NFATC1O95644 943 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 TBX18O95935 607 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 GRSF1Q12849 480 aaKnown RBP eCLIP18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 NR1H3Q13133 447 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 SCD5Q86SK9 330 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 PIGZQ86VD9 579 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 TTC30AQ86WT1 665 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 DDX42Q86XP3 938 aaKnown RBP eCLIP18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 IRF2BP1Q8IU81 584 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 ARHGEF19Q8IW93 802 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 PPM1KQ8N3J5 372 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 SYNPOQ8N3V7 929 aa18.85■□□□□ 0.61
TRAPPC9-211ENST00000521700 SPEM1Q8N4L4 309 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms