RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 BOD1Q96IK1 185 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 MAELQ96JY0 434 aaKnown RBP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 TWNKQ96RR1 684 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 ADAM2Q99965 735 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 PAAF1Q9BRP4 392 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 NUDT22Q9BRQ3 303 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 AGXT2Q9BYV1 514 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 OSBPL5Q9H0X9 879 aaPredicted RBP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 SLC25A32Q9H2D1 315 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 RNPEPQ9H4A4 650 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 ZNF768Q9H5H4 540 aaKnown RBP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 EPS8L2Q9H6S3 715 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 SAYSD1Q9NPB0 183 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 DNAJB11Q9UBS4 358 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 KCNE5Q9UJ90 142 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 CNOT11Q9UKZ1 510 aaKnown RBP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 CNTN6Q9UQ52 1028 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 SNX14Q9Y5W7 946 aa4□□□□□ -1.77
HMGN1P28-201ENST00000521340 SETD1BQ9UPS6 1966 aaKnown RBP4□□□□□ -1.77
HMGN1P28-201ENST00000521340 LOC105369274A0A096LPK9 316 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 LOC102723532A0A0G2JNH3 316 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 J3KTA2 159 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 EPB41L2O43491 1005 aaKnown RBP3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 SRGAP2O75044 1071 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 LMNAP02545 664 aaKnown RBP3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 ITGB3P05106 788 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 CNPP09543 421 aaKnown RBP3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 IDEP14735 1019 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 CAPN3P20807 821 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 ADORA2AP29274 412 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 CNR2P34972 360 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 MAN2A2P49641 1150 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 CXADRP78310 365 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 GRM1Q13255 1194 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 CNGB1Q14028 1251 aaPredicted RBP3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 TOB2Q14106 344 aaPredicted RBP3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 PUM1Q14671 1186 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 LY6KQ17RY6 165 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 CD300EQ496F6 205 aaPredicted RBP3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 HYIQ5T013 277 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 FAM90A2PQ658T7 463 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 SP5Q6BEB4 398 aaPredicted RBP3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 MICALCLQ6ZW33 695 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 RASGRP3Q8IV61 690 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 COLGALT2Q8IYK4 626 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 OR4N4Q8N0Y3 316 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 PAF1Q8N7H5 531 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 OR6Y1Q8NGX8 325 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 CPT1CQ8TCG5 803 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 CSGALNACT1Q8TDX6 532 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 TMEM171Q8WVE6 324 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 EDAQ92838 391 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 HAPLN3Q96S86 360 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 DCLRE1CQ96SD1 692 aaKnown RBP3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 PYM1Q9BRP8 204 aaKnown RBP3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 UBN1Q9NPG3 1134 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 RASSF1Q9NS23 344 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 RXFP3Q9NSD7 469 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 TMOD4Q9NZQ9 345 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 FBXO9Q9UK97 447 aaPredicted RBP3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 RIMKLBQ9ULI2 386 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 MYRFQ9Y2G1 1151 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 NEU2Q9Y3R4 380 aa3.99□□□□□ -1.77
HMGN1P28-201ENST00000521340 B4E171 279 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 TRIM24O15164 1050 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 RPP40O75818 363 aaKnown RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 RASAL1O95294 804 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 GPANK1O95872 356 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 VIPP01282 170 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 ATP1A3P13637 1013 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 ITPKBP27987 946 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 ZEB1P37275 1124 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 TSPAN7P41732 249 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 LIFRP42702 1097 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 MAGEA10P43363 369 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 NDUFV1P49821 464 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 GATMP50440 423 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 ATXN1P54253 815 aaKnown RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 GEMIN4P57678 1058 aaKnown RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 TIRAPP58753 221 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 RPS7P62081 194 aaKnown RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 ADAM17P78536 824 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 KRT17Q04695 432 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 CHRNDQ07001 517 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 CCNIQ14094 377 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 RRP1BQ14684 758 aaKnown RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 ICAM4Q14773 271 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 R3HDM1Q15032 1099 aaKnown RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 BTBD16Q32M84 506 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 GPATCH4Q5T3I0 446 aaKnown RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 RBM20Q5T481 1227 aaKnown RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 MAP3K21Q5TCX8 1036 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 ARHGAP40Q5TG30 622 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 CACHD1Q5VU97 1274 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 RGS7BPQ6MZT1 257 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 NFRKBQ6P4R8 1299 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 KLHL17Q6TDP4 642 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 GDF7Q7Z4P5 450 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 CLNKQ7Z7G1 428 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms