RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 CUEDC2Q9H467 287 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 GKN1Q9NS71 199 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 RBM12Q9NTZ6 932 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 INTS13Q9NVM9 706 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 DDX43Q9NXZ2 648 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 ZMYM5Q9UJ78 669 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 SMG5Q9UPR3 1016 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 FNDC3AQ9Y2H6 1198 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 SNX9Q9Y5X1 595 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 PTPRJQ12913 1337 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 ST8SIA5O15466 376 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 TGFB1I1O43294 461 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 HCRTO43612 131 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 NOL4O94818 638 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 PAPSS2O95340 614 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 YEATS4O95619 227 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 KRT19P08727 400 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 TMEM191BP0C7N4 346 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 TGM1P22735 817 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 CYP2F1P24903 491 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 LHX1P48742 406 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 NRLP54845 237 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 RPL10AP62906 217 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 AMPD3Q01432 767 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 MYL7Q01449 175 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 ORC1Q13415 861 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 SURF1Q15526 300 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 CCDC142Q17RM4 750 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 DUOXA2Q1HG44 320 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 DGKKQ5KSL6 1271 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 LMBRD2Q68DH5 695 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 TXNDC8Q6A555 127 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 Q6ZS52 159 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 STXBP4Q6ZWJ1 553 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 EPM2AIP1Q7L775 607 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 DPH6Q7L8W6 267 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 ADGRF2Q8IZF7 708 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 IQUBQ8NA54 791 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 RIN3Q8TB24 985 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 DHX58Q96C10 678 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 MYRFLQ96LU7 910 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 DUSP9Q99956 384 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 KIAA1586Q9HCI6 787 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 ATP13A2Q9NQ11 1180 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 HPS4Q9NQG7 708 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 THG1LQ9NWX6 298 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 DLL3Q9NYJ7 618 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 HSPBP1Q9NZL4 362 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 GTF3C4Q9UKN8 822 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 CCL26Q9Y258 94 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 CEP250Q9BV73 2442 aa9.93□□□□□ -0.82
CTNNA1-221ENST00000520339 OTOL1A6NHN0 477 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 K7ESF4 209 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 EIF3DO15371 548 aaKnown RBP eCLIP9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 CUTAO60888 179 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 ATP2C2O75185 946 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 TADA3O75528 432 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 LMO2P25791 158 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 PCSK1P29120 753 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 HOXA6P31267 233 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 ASIC1P78348 528 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 DMWDQ09019 674 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 CCINQ13939 588 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 ZNF268Q14587 947 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 PUM1Q14671 1186 aaKnown RBP eCLIP9.92□□□□□ -0.829e-7■□□□□ 9.3
CTNNA1-221ENST00000520339 PPP2R5DQ14738 602 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 PON2Q15165 354 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 ITPRIPL2Q3MIP1 535 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 CFAP221Q4G0U5 840 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 SYNPOQ8N3V7 929 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 GPR161Q8N6U8 529 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 MAB21L3Q8N8X9 362 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 STKLD1Q8NE28 680 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 NOC3LQ8WTT2 800 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 SCFD1Q8WVM8 642 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 KBTBD7Q8WVZ9 684 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 MRPS31Q92665 395 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 TRMT2BQ96GJ1 504 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 FUBP3Q96I24 572 aaKnown RBP eCLIP9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 HPDLQ96IR7 371 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 ANKRD36BP1Q96IX9 119 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 AGPAT3Q9NRZ7 376 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 TDP1Q9NUW8 608 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 C2orf42Q9NWW7 574 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 NCDNQ9UBB6 729 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 MAGED2Q9UNF1 606 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 CITO14578 2027 aa9.92□□□□□ -0.82
CTNNA1-221ENST00000520339 CHURC1-FNTBB4DL54 471 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 CST3P01034 146 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 TNNC2P02585 160 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 FAM163BP0C2L3 166 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 EPB42P16452 691 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 WARSP23381 471 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 HOXC13P31276 330 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 AVPR1AP37288 418 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 MAGEA11P43364 429 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 FNTBP49356 437 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 SNRPFP62306 86 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 TYRO3Q06418 890 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 MYO1EQ12965 1108 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms