RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 WDR83Q9BRX9 315 aaKnown RBP26.89■■□□□ 1.9
COL13A1-213ENST00000520267 PIN4Q9Y237 131 aaKnown RBP26.89■■□□□ 1.9
COL13A1-213ENST00000520267 CLUHO75153 1309 aa26.89■■□□□ 1.9
COL13A1-213ENST00000520267 GOLGA6L7A0A1B0GV03 622 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 ARL4CP56559 192 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 ADAM17P78536 824 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 MAP2K5Q13163 448 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 KRT81Q14533 505 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 DARS2Q6PI48 645 aaKnown RBP26.88■■□□□ 1.89
COL13A1-213ENST00000520267 C1orf228Q6PIY5 440 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 TRABD2AQ86V40 505 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 UNC93AQ86WB7 457 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 C7orf31Q8N865 590 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 P3H4Q92791 437 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 SAMD15Q9P1V8 674 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 UBQLN1Q9UMX0 589 aaKnown RBP26.88■■□□□ 1.89
COL13A1-213ENST00000520267 TREHO43280 583 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 ZNF865P0CJ78 1059 aaPredicted RBP26.88■■□□□ 1.89
COL13A1-213ENST00000520267 IL4RP24394 825 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 ROR1Q01973 937 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 SNX17Q15036 470 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 TTC31Q49AM3 519 aaPredicted RBP26.88■■□□□ 1.89
COL13A1-213ENST00000520267 FAM182AQ5T1J6 154 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 SESTD1Q86VW0 696 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 NSRP1Q9H0G5 558 aaKnown RBP26.88■■□□□ 1.89
COL13A1-213ENST00000520267 RNF39Q9H2S5 420 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 UBN1Q9NPG3 1134 aa26.88■■□□□ 1.89
COL13A1-213ENST00000520267 PDGFRBP09619 1106 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 FGFR1P11362 822 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 PSEN2P49810 448 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 ACTN3Q08043 901 aaPredicted RBP26.87■■□□□ 1.89
COL13A1-213ENST00000520267 TFDP2Q14188 446 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 PCBP1Q15365 356 aaKnown RBP eCLIP26.87■■□□□ 1.89
COL13A1-213ENST00000520267 FAM47CQ5HY64 1035 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 ARHGAP17Q68EM7 881 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 KBTBD7Q8WVZ9 684 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 CCT6BQ92526 530 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 MRRFQ96E11 262 aaKnown RBP26.87■■□□□ 1.89
COL13A1-213ENST00000520267 XPO7Q9UIA9 1087 aaKnown RBP26.87■■□□□ 1.89
COL13A1-213ENST00000520267 ZMYND8Q9ULU4 1186 aaPredicted RBP26.87■■□□□ 1.89
COL13A1-213ENST00000520267 SMIM28A0A1B0GU29 152 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 PIRO00625 290 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 SPTLC1O15269 473 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 SDC4P31431 198 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 MTM1Q13496 603 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 PKN2Q16513 984 aaKnown RBP26.87■■□□□ 1.89
COL13A1-213ENST00000520267 CA9Q16790 459 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 FGFR1OP2Q9NVK5 253 aa26.87■■□□□ 1.89
COL13A1-213ENST00000520267 DNM1LO00429 736 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 CCDC130P13994 396 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 TFE3P19532 575 aaPredicted RBP26.86■■□□□ 1.89
COL13A1-213ENST00000520267 LMO2P25791 158 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 AXLP30530 894 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 SSTR1P30872 391 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 BASP1P80723 227 aaKnown RBP26.86■■□□□ 1.89
COL13A1-213ENST00000520267 ITIH4Q14624 930 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 BOLA3Q53S33 107 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 ANKRD20A8PQ5CZ79 823 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 FBXO47Q5MNV8 452 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.86■■□□□ 1.89
COL13A1-213ENST00000520267 CLEC4CQ8WTT0 213 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 PYROXD1Q8WU10 500 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 SNRNP25Q9BV90 132 aaKnown RBP26.86■■□□□ 1.89
COL13A1-213ENST00000520267 PHACTR1Q9C0D0 580 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 PCDH18Q9HCL0 1135 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 ADORA2BP29275 332 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 PDK2Q15119 407 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 CCL14Q16627 93 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 UBXN11Q5T124 520 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 ZNF618Q5T7W0 954 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 ARHGEF18Q6ZSZ5 1173 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 PLD5Q8N7P1 536 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 ANKS4BQ8N8V4 417 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 STK32AQ8WU08 396 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 NKIRAS1Q9NYS0 192 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 RABGEF1Q9UJ41 708 aa26.86■■□□□ 1.89
COL13A1-213ENST00000520267 E7ESA3 106 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 H7C0C1 242 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 HAS3O00219 553 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 SPAG7O75391 227 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 STIP1P31948 543 aaKnown RBP26.85■■□□□ 1.89
COL13A1-213ENST00000520267 STX2P32856 288 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 RDXP35241 583 aaKnown RBP26.85■■□□□ 1.89
COL13A1-213ENST00000520267 ATP5OP48047 213 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 BEX3Q00994 111 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 NR1H3Q13133 447 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 MAP7D3Q8IWC1 876 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 PQLC3Q8N755 202 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 TEKT4Q8WW24 435 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 KIF9Q9HAQ2 790 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 GOLGA2P5Q9HBQ8 144 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 KPNA7A9QM74 516 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 MYL3P08590 195 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 HDAC4P56524 1084 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 FBXO36Q8NEA4 188 aa26.85■■□□□ 1.89
COL13A1-213ENST00000520267 CCT8L1PA6NM43 557 aa26.84■■□□□ 1.89
COL13A1-213ENST00000520267 SNX3O60493 162 aa26.84■■□□□ 1.89
COL13A1-213ENST00000520267 SOX4Q06945 474 aaPredicted RBP26.84■■□□□ 1.89
COL13A1-213ENST00000520267 EFTUD2Q15029 972 aaKnown RBP eCLIP26.84■■□□□ 1.89
COL13A1-213ENST00000520267 LACTB2Q53H82 288 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms