RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 MYO9BQ13459 2157 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 PLXNA4Q9HCM2 1894 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 A0A087WUV0 522 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 A0A1W2PQC6 194 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 NCAM2O15394 837 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 THAP12O43422 761 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 B4GALT3O60512 393 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 IPO7O95373 1038 aaKnown RBP5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 PAPLNO95428 1278 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 CST3P01034 146 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 RHOP08100 348 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 WEE2P0C1S8 567 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 MYL4P12829 197 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 FERP16591 822 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 BMP6P22004 513 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 FECHP22830 423 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 YWHAQP27348 245 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 GNA15P30679 374 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 PMS1P54277 932 aaKnown RBP5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 KCNC3Q14003 757 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 PPP2R5DQ14738 602 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 KRT31Q15323 416 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 CLUL1Q15846 466 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 CBWD6Q4V339 395 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 CBWD3Q5JTY5 395 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 CBWD5Q5RIA9 395 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 CDKAL1Q5VV42 579 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 ARHGAP17Q68EM7 881 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 TOGARAM2Q6ZUX3 1019 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 LIMS2Q7Z4I7 341 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 GRASPQ7Z6J2 395 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 ACOT1Q86TX2 421 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 FAM35AQ86V20 835 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 GJD3Q8N144 294 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 ANKRD52Q8NB46 1076 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 RBBP8NLQ8NC74 664 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 TMEM35BQ8NCS4 154 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 CSGALNACT1Q8TDX6 532 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 RNF139Q8WU17 664 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 SUSD6Q92537 303 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 FBXO32Q969P5 355 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 TRIM11Q96F44 468 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 EEF2KMTQ96G04 330 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 PCED1BQ96HM7 432 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 RPGRIP1Q96KN7 1286 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 PANX2Q96RD6 677 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 MED15Q96RN5 788 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 MYCBPQ99417 103 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 PRRX2Q99811 253 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 DDX50Q9BQ39 737 aaKnown RBP5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 PI4K2AQ9BTU6 479 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 C1QTNF1Q9BXJ1 281 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 NAA15Q9BXJ9 866 aaKnown RBP5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 ZNF518BQ9C0D4 1074 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 IKZF4Q9H2S9 585 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 ATXN3LQ9H3M9 355 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 MFSD1Q9H3U5 465 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 SMYD3Q9H7B4 428 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 ANKZF1Q9H8Y5 726 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 ZFP14Q9HCL3 533 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.94□□□□□ -1.466e-7■■■■■ 62.1
CTNNA1-220ENST00000520260 FANCLQ9NW38 375 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 CLEC1BQ9P126 229 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 EPS15L1Q9UBC2 864 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 CACNG4Q9UBN1 327 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 FBXL21Q9UKT6 434 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 MAGED2Q9UNF1 606 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 SORCS3Q9UPU3 1222 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 ZNF510Q9Y2H8 683 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 JRKLQ9Y4A0 524 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 LAMA3Q16787 3333 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 PTPRJQ12913 1337 aa5.94□□□□□ -1.46
CTNNA1-220ENST00000520260 PRRC2BQ5JSZ5 2229 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 SLC38A8A6NNN8 435 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 EIF3CLB5ME19 914 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 F8W810 466 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 M0QYV0 167 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 TNFRSF10AO00220 468 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 MAN2B1O00754 1011 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 CAPN9O14815 690 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 PPEF2O14830 753 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 XPO1O14980 1071 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 LINC01565O15544 149 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 MEFVO15553 781 aaPredicted RBP5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 ECI2O75521 394 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 NOL4O94818 638 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 VNN1O95497 513 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 GLP2RO95838 553 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 CKMP06732 381 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 CCDC175P0C221 793 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 SPATA31D3P0C874 917 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 SLC2A3P11169 496 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 ATP1A3P13637 1013 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 GLULP15104 373 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 ZNF18P17022 549 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 BDNFP23560 247 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 ACAT1P24752 427 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 MCM3P25205 808 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 GABRR2P28476 465 aa5.93□□□□□ -1.46
CTNNA1-220ENST00000520260 ADORA2BP29275 332 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms