RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 PNPLA8Q9NP80 782 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 LPAR3Q9UBY5 353 aa4.5□□□□□ -1.69
SKP1-205ENST00000519054 AQP7P3A6NL99 342 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 AGPSO00116 658 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 CES2O00748 559 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 KPNA5O15131 536 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 PMPCBO75439 489 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 INMTO95050 263 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 GKP32189 559 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 SUMO2P61956 95 aaKnown RBP4.49□□□□□ -1.69
SKP1-205ENST00000519054 HTRA4P83105 476 aaPredicted RBP4.49□□□□□ -1.69
SKP1-205ENST00000519054 HOXA4Q00056 320 aaPredicted RBP4.49□□□□□ -1.69
SKP1-205ENST00000519054 SRSF4Q08170 494 aaKnown RBP4.49□□□□□ -1.69
SKP1-205ENST00000519054 DAG1Q14118 895 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 PRAMEF17Q5VTA0 474 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 RRAGBQ5VZM2 374 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 PLAG1Q6DJT9 500 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 KIRREL2Q6UWL6 708 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 TRIM72Q6ZMU5 477 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 RNF44Q7L0R7 432 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 LIX1LQ8IVB5 337 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 SEMA6DQ8NFY4 1073 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 RSPRY1Q96DX4 576 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 DAZAP1Q96EP5 407 aaKnown RBP4.49□□□□□ -1.69
SKP1-205ENST00000519054 THAP7Q9BT49 309 aaPredicted RBP4.49□□□□□ -1.69
SKP1-205ENST00000519054 SARGQ9BW04 601 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 INO80BQ9C086 356 aaPredicted RBP4.49□□□□□ -1.69
SKP1-205ENST00000519054 CIPCQ9C0C6 399 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 AS3MTQ9HBK9 375 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 DKK4Q9UBT3 224 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 AMFRQ9UKV5 643 aa4.49□□□□□ -1.69
SKP1-205ENST00000519054 CGB1A6NKQ9 187 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 KIF3BO15066 747 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 IL18RAPO95256 599 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 ANXA2P07355 339 aaKnown RBP4.48□□□□□ -1.69
SKP1-205ENST00000519054 PARP1P09874 1014 aaKnown RBP4.48□□□□□ -1.69
SKP1-205ENST00000519054 NTSR1P30989 418 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 GATMP50440 423 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 ALDH5A1P51649 535 aaPredicted RBP4.48□□□□□ -1.69
SKP1-205ENST00000519054 TIRAPP58753 221 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 PSG6Q00889 435 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 TIAL1Q01085 375 aaKnown RBP eCLIP4.48□□□□□ -1.69
SKP1-205ENST00000519054 SLC10A2Q12908 348 aaPredicted RBP4.48□□□□□ -1.69
SKP1-205ENST00000519054 GRM1Q13255 1194 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 RNASE12Q5GAN4 147 aaKnown RBP4.48□□□□□ -1.69
SKP1-205ENST00000519054 KLHDC7AQ5VTJ3 777 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 MTHFD1LQ6UB35 978 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 RAB11FIP4Q86YS3 637 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 SRRM1Q8IYB3 904 aaKnown RBP4.48□□□□□ -1.69
SKP1-205ENST00000519054 SDR16C5Q8N3Y7 309 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 C11orf44Q8N8P7 122 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 TERB1Q8NA31 727 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 FAM83DQ9H4H8 585 aa4.48□□□□□ -1.69
SKP1-205ENST00000519054 POM121BA6NF01 834 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 TISP43B9A030 160 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 FOXN3O00409 490 aaPredicted RBP4.47□□□□□ -1.69
SKP1-205ENST00000519054 EXOC5O00471 708 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 APAF1O14727 1248 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 SPRY2O43597 315 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 FGAP02671 866 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 A1BGP04217 495 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 MYCLP12524 364 aaPredicted RBP4.47□□□□□ -1.69
SKP1-205ENST00000519054 SLC5A1P13866 664 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 YY1P25490 414 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 RENBPP51606 427 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 ZNF543Q08ER8 600 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 FOXF2Q12947 444 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 SAFBQ15424 915 aaKnown RBP eCLIP4.47□□□□□ -1.69
SKP1-205ENST00000519054 ZKSCAN2Q63HK3 967 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 SERPINA13PQ6UXR4 307 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 KSR2Q6VAB6 950 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 ZNF66Q6ZN08 573 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 CHSY1Q86X52 802 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 CCDC33Q8N5R6 958 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 PNLDC1Q8NA58 520 aaKnown RBP4.47□□□□□ -1.69
SKP1-205ENST00000519054 IQCDQ96DY2 449 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 SNX18Q96RF0 628 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 MMS19Q96T76 1030 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 TBCBQ99426 244 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 TFCP2L1Q9NZI6 479 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 RGS17Q9UGC6 210 aaPredicted RBP4.47□□□□□ -1.69
SKP1-205ENST00000519054 HPSEQ9Y251 543 aa4.47□□□□□ -1.69
SKP1-205ENST00000519054 SETD1BQ9UPS6 1966 aaKnown RBP4.46□□□□□ -1.7
SKP1-205ENST00000519054 PRRT4C9JH25 899 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 PMM2O15305 246 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 THAP12O43422 761 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 MYL3P08590 195 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 CYP2D6P10635 497 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 TRIM27P14373 513 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 CREB1P16220 341 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 GNALP38405 381 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 ABCG1P45844 678 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 PRIM2P49643 509 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 TUBA4AP68366 448 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 LMAN2Q12907 356 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 MANEALQ5VSG8 457 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 CLEC9AQ6UXN8 241 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 PTCHD4Q6ZW05 846 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 SFTPA1Q8IWL2 248 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 METTL25Q8N6Q8 603 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms