RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CPQ	Q9Y646	472 aa		25.56	■■□□□ 1.68
CNOT7-204	ENST00000518885	COL4A3	Q01955	1670 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	GFRA3	O60609	400 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	NRL	P54845	237 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	CSTF1	Q05048	431 aa	Known RBP	25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	MTAP	Q13126	283 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	TRIM68	Q6AZZ1	485 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	CLEC20A	Q6ZU45	233 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	TADA2B	Q86TJ2	420 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	WHAMM	Q8TF30	809 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	NT5C1B	Q96P26	610 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	DUSP16	Q9BY84	665 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	ECT2	Q9H8V3	914 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	HPS4	Q9NQG7	708 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	RWDD2A	Q9UIY3	292 aa		25.55	■■□□□ 1.68
CNOT7-204	ENST00000518885	KIF26A	Q9ULI4	1882 aa	Predicted RBP	25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	MARS	P56192	900 aa	Known RBP	25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	STX17	P56962	302 aa		25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	PON2	Q15165	354 aa		25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	SPEM1	Q8N4L4	309 aa		25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	MLKL	Q8NB16	471 aa		25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	ZMIZ2	Q8NF64	920 aa		25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	CCDC26	Q8TAB7	109 aa		25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	GBP4	Q96PP9	640 aa		25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	SRRT	Q9BXP5	876 aa	Known RBP	25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	CHORDC1	Q9UHD1	332 aa	Predicted RBP	25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	KIAA1257	Q9ULG3	409 aa		25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	SCML2	Q9UQR0	700 aa		25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	WNT6	Q9Y6F9	365 aa		25.54	■■□□□ 1.68
CNOT7-204	ENST00000518885	PSEN1	P49768	467 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	GOLGA8F	Q08AF8	430 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	GOLGA8DP	Q0D2H9	430 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	TXNDC11	Q6PKC3	985 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	SLC4A11	Q8NBS3	891 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	TATDN2	Q93075	761 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	UBXN6	Q9BZV1	441 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	RNF38	Q9H0F5	515 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	CLSTN2	Q9H4D0	955 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	PRMT8	Q9NR22	394 aa	Predicted RBP	25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	GMIP	Q9P107	970 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	TBC1D14	Q9P2M4	693 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	DACH1	Q9UI36	760 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	PCDHGA2	Q9Y5H1	932 aa		25.53	■■□□□ 1.68
CNOT7-204	ENST00000518885	TRDMT1	O14717	391 aa	Known RBP	25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	BEST1	O76090	585 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	ZDHHC11B	P0C7U3	371 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	ARSA	P15289	507 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	ACO1	P21399	889 aa	Known RBP	25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	DRD1	P21728	446 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	RAD23B	P54727	409 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	EML3	Q32P44	896 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	ARHGAP17	Q68EM7	881 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	CLEC17A	Q6ZS10	378 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	TRIM59	Q8IWR1	403 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	ATRIP	Q8WXE1	791 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	JAKMIP2	Q96AA8	810 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	CDK5RAP1	Q96SZ6	601 aa	Known RBP	25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	ARID3A	Q99856	593 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	SMPD4	Q9NXE4	827 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	HESX1	Q9UBX0	185 aa		25.52	■■□□□ 1.68
CNOT7-204	ENST00000518885	ANAPC1	Q9H1A4	1944 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	E2F8	A0AVK6	867 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	COCH	O43405	550 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	ATG13	O75143	517 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	AFP	P02771	609 aa	Known RBP	25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	GJA4	P35212	333 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	CXCL12	P48061	93 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	LRMP	Q12912	555 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	CCIN	Q13939	588 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	TPD52L1	Q16890	204 aa	Predicted RBP	25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	FBXO43	Q4G163	708 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	SGO2	Q562F6	1265 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	MAML2	Q8IZL2	1156 aa	Predicted RBP	25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	RIN3	Q8TB24	985 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	OTUB2	Q96DC9	234 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	P2RY13	Q9BPV8	354 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	ZSCAN32	Q9NX65	697 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	CFAP97	Q9P2B7	532 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	SH3BP1	Q9Y3L3	701 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	PATJ	Q8NI35	1801 aa		25.51	■■□□□ 1.67
CNOT7-204	ENST00000518885	GOLGA6L22	H0YM25	854 aa		25.5	■■□□□ 1.67
CNOT7-204	ENST00000518885	TLR5	O60602	858 aa		25.5	■■□□□ 1.67
CNOT7-204	ENST00000518885	F5	P12259	2224 aa		25.5	■■□□□ 1.67
CNOT7-204	ENST00000518885	HELZ	P42694	1942 aa	Known RBP	25.5	■■□□□ 1.67
CNOT7-204	ENST00000518885	KCNH2	Q12809	1159 aa		25.5	■■□□□ 1.67
CNOT7-204	ENST00000518885	TMEM196	Q5HYL7	178 aa		25.5	■■□□□ 1.67
CNOT7-204	ENST00000518885	ARHGAP18	Q8N392	663 aa		25.5	■■□□□ 1.67
CNOT7-204	ENST00000518885	PPM1K	Q8N3J5	372 aa		25.5	■■□□□ 1.67
CNOT7-204	ENST00000518885	ANKRD52	Q8NB46	1076 aa		25.5	■■□□□ 1.67
CNOT7-204	ENST00000518885	NUP62CL	Q9H1M0	184 aa		25.5	■■□□□ 1.67
CNOT7-204	ENST00000518885	PRR23A	A6NEV1	266 aa		25.49	■■□□□ 1.67
CNOT7-204	ENST00000518885	ADH1C	P00326	375 aa		25.49	■■□□□ 1.67
CNOT7-204	ENST00000518885	ATP5C1	P36542	298 aa	Known RBP	25.49	■■□□□ 1.67
CNOT7-204	ENST00000518885	KIF11	P52732	1056 aa		25.49	■■□□□ 1.67
CNOT7-204	ENST00000518885	CCDC186	Q7Z3E2	898 aa		25.49	■■□□□ 1.67
CNOT7-204	ENST00000518885	CD101	Q93033	1021 aa		25.49	■■□□□ 1.67
CNOT7-204	ENST00000518885	FAM81B	Q96LP2	452 aa		25.49	■■□□□ 1.67
CNOT7-204	ENST00000518885	CCSER2	Q9H7U1	834 aa		25.49	■■□□□ 1.67

Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms