RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 PRKAB1Q9Y478 270 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 COL1A2P08123 1366 aa6.9□□□□□ -1.31
CCDC6-203ENST00000518638 FAM208BQ5VWN6 2430 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 DMXL1Q9Y485 3027 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 ZNF213O14771 459 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 PRICKLE3O43900 615 aaPredicted RBP6.89□□□□□ -1.31
CCDC6-203ENST00000518638 MGEA5O60502 916 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 WEE2P0C1S8 567 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 GRK2P25098 689 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 GRK3P35626 688 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 CRYBB1P53674 252 aaPredicted RBP6.89□□□□□ -1.31
CCDC6-203ENST00000518638 STARD6P59095 220 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 FAM189BP81408 668 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 MTMR1Q13613 665 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 PTPN14Q15678 1187 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 TMEM266Q2M3C6 531 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 MCMDC2Q4G0Z9 681 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 TRIM61Q5EBN2 209 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 IFIT1BQ5T764 474 aaKnown RBP6.89□□□□□ -1.31
CCDC6-203ENST00000518638 VPS53Q5VIR6 699 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 HOMER1Q86YM7 354 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 VPS52Q8N1B4 723 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 C12orf76Q8N812 135 aaPredicted RBP6.89□□□□□ -1.31
CCDC6-203ENST00000518638 ZBTB44Q8NCP5 570 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 SMARCC2Q8TAQ2 1214 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 EVI5LQ96CN4 794 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 PWWP2AQ96N64 755 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 CASD1Q96PB1 797 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 MRPL4Q9BYD3 311 aaKnown RBP6.89□□□□□ -1.31
CCDC6-203ENST00000518638 SPATA6Q9NWH7 488 aaPredicted RBP6.89□□□□□ -1.31
CCDC6-203ENST00000518638 DACT1Q9NYF0 836 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 ST3GAL5Q9UNP4 418 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 GINS2Q9Y248 185 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 SSX2IPQ9Y2D8 614 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 PCDHA5Q9Y5H7 936 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 ZFP37Q9Y6Q3 630 aaPredicted RBP6.89□□□□□ -1.31
CCDC6-203ENST00000518638 CLUHO75153 1309 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 C2orf16Q68DN1 1984 aa6.89□□□□□ -1.31
CCDC6-203ENST00000518638 NEDD4P46934 1319 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 KANSL1LA0AUZ9 987 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 SGSM2O43147 1006 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 NARSO43776 548 aaKnown RBP6.88□□□□□ -1.31
CCDC6-203ENST00000518638 HBP1O60381 514 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 KCNA2P16389 499 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 EPCAMP16422 314 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 BCAR1P56945 870 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 HAND2P61296 217 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 PFKPQ01813 784 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 PLEKHG6Q3KR16 790 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 EMC4Q5J8M3 183 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 ZFYVE27Q5T4F4 411 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 TSHZ3Q63HK5 1081 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 LAIR1Q6GTX8 287 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 MTHFD1LQ6UB35 978 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 DDX53Q86TM3 631 aaKnown RBP6.88□□□□□ -1.31
CCDC6-203ENST00000518638 SLC44A3Q8N4M1 653 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 ENAHQ8N8S7 591 aaPredicted RBP6.88□□□□□ -1.31
CCDC6-203ENST00000518638 TP53I13Q8NBR0 393 aaPredicted RBP6.88□□□□□ -1.31
CCDC6-203ENST00000518638 GSTCDQ8NEC7 633 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 SLC22A17Q8WUG5 538 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 ALG3Q92685 438 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 NELL2Q99435 816 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 SDF4Q9BRK5 362 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 KRT23Q9C075 422 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 BCAS3Q9H6U6 928 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 NCOA5Q9HCD5 579 aaKnown RBP6.88□□□□□ -1.31
CCDC6-203ENST00000518638 WDR6Q9NNW5 1121 aaKnown RBP6.88□□□□□ -1.31
CCDC6-203ENST00000518638 PLA2G2DQ9UNK4 145 aa6.88□□□□□ -1.31
CCDC6-203ENST00000518638 NOC2LQ9Y3T9 749 aaKnown RBP6.88□□□□□ -1.31
CCDC6-203ENST00000518638 NFASCO94856 1347 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 GSTTP1A0A1W2PQM5 241 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 TMEM8BA6NDV4 472 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 C1RP00736 705 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 SOD2P04179 222 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 PROS1P07225 676 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 NAT1P18440 290 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 MX1P20591 662 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 KLRC2P26717 231 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 PMLP29590 882 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 METAP2P50579 478 aaKnown RBP eCLIP6.87□□□□□ -1.31
CCDC6-203ENST00000518638 STAT5BP51692 787 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 CLCN4P51793 760 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 CSTF1Q05048 431 aaKnown RBP6.87□□□□□ -1.31
CCDC6-203ENST00000518638 PLCB4Q15147 1175 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 FAM160B1Q5W0V3 765 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 IL31Q6EBC2 164 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 LRRC55Q6ZSA7 311 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 MTDHQ86UE4 582 aaKnown RBP6.87□□□□□ -1.31
CCDC6-203ENST00000518638 FAM228AQ86W67 206 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 ECHDC2Q86YB7 292 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 TBC1D10CQ8IV04 446 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 IGDCC3Q8IVU1 814 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 MAML2Q8IZL2 1156 aaPredicted RBP6.87□□□□□ -1.31
CCDC6-203ENST00000518638 CELF5Q8N6W0 485 aaKnown RBP6.87□□□□□ -1.31
CCDC6-203ENST00000518638 HDAC7Q8WUI4 952 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 NELL1Q92832 810 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 JAM3Q9BX67 310 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 RNF38Q9H0F5 515 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 RIOX1Q9H6W3 641 aa6.87□□□□□ -1.31
CCDC6-203ENST00000518638 DCTPP1Q9H773 170 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms