RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ABCB4P21439 1286 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 PCSK6P29122 969 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 SLC5A2P31639 672 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 CXCR5P32302 372 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 GATMP50440 423 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 PGDP52209 483 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 ITGA8P53708 1063 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 SOX10P56693 466 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 TIRAPP58753 221 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 STK3Q13188 491 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 KRT72Q14CN4 511 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 TBC1D25Q3MII6 688 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 SLC9A4Q6AI14 798 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 MRNIPQ6NTE8 343 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 PARS2Q7L3T8 475 aaKnown RBP4.39□□□□□ -1.71
VPS13B-207ENST00000518569 SYTL1Q8IYJ3 562 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 STK33Q9BYT3 514 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 PLCB1Q9NQ66 1216 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 RGL1Q9NZL6 768 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 TMOD4Q9NZQ9 345 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 HPSEQ9Y251 543 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 DRG1Q9Y295 367 aaKnown RBP4.39□□□□□ -1.71
VPS13B-207ENST00000518569 DMRT1Q9Y5R6 373 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 WDR33Q9C0J8 1336 aaKnown RBP4.39□□□□□ -1.71
VPS13B-207ENST00000518569 OR2W5A6NFC9 320 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 PSMD9O00233 223 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 ADAMTS3O15072 1205 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 SNX2O60749 519 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 COQ9O75208 318 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 FESP07332 822 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 EGR1P18146 543 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 ATICP31939 592 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 PPM1AP35813 382 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 TECP42680 631 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 MTHFSP49914 203 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 CLCN2P51788 898 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 CACNA2D1P54289 1103 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 KCNAB1Q14722 419 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 CLCA4Q14CN2 919 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 LY6KQ17RY6 165 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 SLC5A9Q2M3M2 681 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 FAXCQ5TGI0 409 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 ARL6IP4Q66PJ3 421 aaKnown RBP4.38□□□□□ -1.71
VPS13B-207ENST00000518569 CRTC1Q6UUV9 634 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 OLFML1Q6UWY5 402 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 CAND1Q86VP6 1230 aaKnown RBP4.38□□□□□ -1.71
VPS13B-207ENST00000518569 MBD3L2Q8NHZ7 208 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-207ENST00000518569 R3HDM4Q96D70 268 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 CHFRQ96EP1 664 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 HIST1H2AAQ96QV6 131 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 TIMP4Q99727 224 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 WDR12Q9GZL7 423 aaKnown RBP4.38□□□□□ -1.71
VPS13B-207ENST00000518569 SLC25A32Q9H2D1 315 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 SLC17A6Q9P2U8 582 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 TAGLN3Q9UI15 199 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 CA14Q9ULX7 337 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 LRCH1Q9Y2L9 728 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 PCDHGB2Q9Y5G2 931 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 ENTPD2Q9Y5L3 495 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 COL15A1P39059 1388 aa4.38□□□□□ -1.71
VPS13B-207ENST00000518569 FAM234BA2RU67 622 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 LINC00473A8K010 186 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 CCNT2O60583 730 aaKnown RBP4.37□□□□□ -1.71
VPS13B-207ENST00000518569 PEX14O75381 377 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 NDST3O95803 873 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 LMNAP02545 664 aaKnown RBP4.37□□□□□ -1.71
VPS13B-207ENST00000518569 ERBB2P04626 1255 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 FAM163BP0C2L3 166 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 ELFN1P0C7U0 828 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 HGFP14210 728 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 JUPP14923 745 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 NDUFB7P17568 137 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 WT1P19544 449 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-207ENST00000518569 GKP32189 559 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 TPTEP56180 551 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 TNFAIP2Q03169 654 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 MAPKAPK3Q16644 382 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.37□□□□□ -1.71
VPS13B-207ENST00000518569 AARS2Q5JTZ9 985 aaKnown RBP4.37□□□□□ -1.71
VPS13B-207ENST00000518569 Q6ZWC4 215 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 CCDC28AQ8IWP9 274 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 GLIS1Q8NBF1 620 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 SIMC1Q8NDZ2 872 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 ABHD5Q8WTS1 349 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 XAGE5Q8WWM1 108 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 PMM1Q92871 262 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 ZBTB45Q96K62 511 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-207ENST00000518569 DUSP26Q9BV47 211 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 DPCDQ9BVM2 203 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-207ENST00000518569 TTLL2Q9BWV7 592 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 TMEM8AQ9HCN3 771 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 DUSP22Q9NRW4 184 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 DLL3Q9NYJ7 618 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 NKX1-2Q9UD57 310 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-207ENST00000518569 ZMYND8Q9ULU4 1186 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-207ENST00000518569 DAAM1Q9Y4D1 1078 aa4.37□□□□□ -1.71
VPS13B-207ENST00000518569 FER1L4A9Z1Z3 1794 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 GOLGA6L3A6NEY3 463 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 A8MVJ9 347 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 PODXLO00592 558 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms