RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 GPS1Q13098 491 aa27.76■■■□□ 2.03
COL13A1-210ENST00000517713 MMRN1Q13201 1228 aa27.76■■■□□ 2.03
COL13A1-210ENST00000517713 CROCCP2Q86T23 111 aa27.76■■■□□ 2.03
COL13A1-210ENST00000517713 TMEM109Q9BVC6 243 aa27.76■■■□□ 2.03
COL13A1-210ENST00000517713 PCDH9Q9HC56 1237 aa27.76■■■□□ 2.03
COL13A1-210ENST00000517713 PTPN9P43378 593 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 SCNN1GP51170 649 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 PTK7Q13308 1070 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 ITGA7Q13683 1181 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 DPYSL3Q14195 570 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 ARCQ7LC44 396 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 MAP7D3Q8IWC1 876 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 FUKQ8N0W3 1084 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 ARFGAP2Q8N6H7 521 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 TEKT4Q8WW24 435 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 PWWP2AQ96N64 755 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 DDX23Q9BUQ8 820 aaKnown RBP27.75■■■□□ 2.03
COL13A1-210ENST00000517713 DUSP16Q9BY84 665 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 FOXP3Q9BZS1 431 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 DNAJC17Q9NVM6 304 aaKnown RBP27.75■■■□□ 2.03
COL13A1-210ENST00000517713 SRRDQ9UH36 339 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.75■■■□□ 2.03
COL13A1-210ENST00000517713 MGEA5O60502 916 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 SLC8A3P57103 927 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 KRT81Q14533 505 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 PDK2Q15119 407 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 REM2Q8IYK8 340 aaPredicted RBP27.75■■■□□ 2.03
COL13A1-210ENST00000517713 CAPNS2Q96L46 248 aa27.75■■■□□ 2.03
COL13A1-210ENST00000517713 TPX2Q9ULW0 747 aaKnown RBP27.75■■■□□ 2.03
COL13A1-210ENST00000517713 ZNF623O75123 536 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 IFNB1P01574 187 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 RAB27AP51159 221 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 TTC19Q6DKK2 380 aaPredicted RBP27.74■■■□□ 2.03
COL13A1-210ENST00000517713 LRRC31Q6UY01 552 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 ZCCHC9Q8N567 271 aaKnown RBP27.74■■■□□ 2.03
COL13A1-210ENST00000517713 PGM2Q96G03 612 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 TBCBQ99426 244 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 DDX43Q9NXZ2 648 aaKnown RBP27.74■■■□□ 2.03
COL13A1-210ENST00000517713 DDX20Q9UHI6 824 aaKnown RBP27.74■■■□□ 2.03
COL13A1-210ENST00000517713 NOD1Q9Y239 953 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 TLDC2A0PJX2 215 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 TTC4O95801 387 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 HDAC4P56524 1084 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 MAGOHP61326 146 aaKnown RBP27.74■■■□□ 2.03
COL13A1-210ENST00000517713 TFDP2Q14188 446 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 LPIN1Q14693 890 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 CCDC142Q17RM4 750 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 C6orf118Q5T5N4 469 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 RNF180Q86T96 592 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 TMEM86AQ8N2M4 240 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 TLCD1Q96CP7 247 aa27.74■■■□□ 2.03
COL13A1-210ENST00000517713 TRMT13Q9NUP7 481 aaKnown RBP27.74■■■□□ 2.03
COL13A1-210ENST00000517713 THSD7BQ9C0I4 1608 aa27.73■■■□□ 2.03
COL13A1-210ENST00000517713 CLDN5O00501 218 aa27.73■■■□□ 2.03
COL13A1-210ENST00000517713 ACSL3O95573 720 aa27.73■■■□□ 2.03
COL13A1-210ENST00000517713 PECAM1P16284 738 aaPredicted RBP27.73■■■□□ 2.03
COL13A1-210ENST00000517713 HOXD10P28358 340 aa27.73■■■□□ 2.03
COL13A1-210ENST00000517713 RPL9P32969 192 aaKnown RBP27.73■■■□□ 2.03
COL13A1-210ENST00000517713 DSC3Q14574 896 aa27.73■■■□□ 2.03
COL13A1-210ENST00000517713 DEFB115Q30KQ5 88 aa27.73■■■□□ 2.03
COL13A1-210ENST00000517713 MAP3K21Q5TCX8 1036 aa27.73■■■□□ 2.03
COL13A1-210ENST00000517713 DSTYKQ6XUX3 929 aa27.73■■■□□ 2.03
COL13A1-210ENST00000517713 CEP128Q6ZU80 1094 aa27.73■■■□□ 2.03
COL13A1-210ENST00000517713 PIGZQ86VD9 579 aa27.73■■■□□ 2.03
COL13A1-210ENST00000517713 C11orf84Q9BUA3 381 aaPredicted RBP27.73■■■□□ 2.03
COL13A1-210ENST00000517713 NDC80O14777 642 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 CABYRO75952 493 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 TFE3P19532 575 aaPredicted RBP27.72■■■□□ 2.03
COL13A1-210ENST00000517713 LHX1P48742 406 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 EIF3EP60228 445 aaKnown RBP27.72■■■□□ 2.03
COL13A1-210ENST00000517713 ZSCAN26Q16670 478 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 ZC3H12AQ5D1E8 599 aaKnown RBP27.72■■■□□ 2.03
COL13A1-210ENST00000517713 MDH1BQ5I0G3 518 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 KIAA0319Q5VV43 1072 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 PAQR9Q6ZVX9 377 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 RELL1Q8IUW5 271 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 RNF169Q8NCN4 708 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 RSAD2Q8WXG1 361 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 CENPIQ92674 756 aaPredicted RBP27.72■■■□□ 2.03
COL13A1-210ENST00000517713 RNF157Q96PX1 679 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 SNRNP25Q9BV90 132 aaKnown RBP27.72■■■□□ 2.03
COL13A1-210ENST00000517713 C10orf88Q9H8K7 445 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 GPATCH2LQ9NWQ4 482 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 MDM4O15151 490 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 NPR3P17342 541 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 KYNUQ16719 465 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 EFHC1Q5JVL4 640 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 C3orf58Q8NDZ4 430 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 CD99L2Q8TCZ2 262 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 MED10Q9BTT4 135 aa27.72■■■□□ 2.03
COL13A1-210ENST00000517713 ROPN1BQ9BZX4 212 aaPredicted RBP27.72■■■□□ 2.03
COL13A1-210ENST00000517713 ROPN1Q9HAT0 212 aaPredicted RBP27.72■■■□□ 2.03
COL13A1-210ENST00000517713 A0A0U1RQF3 1178 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 CASTOR2A6NHX0 329 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 SMIM23A6NLE4 172 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 DCDC2CA8MYV0 355 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 RASGRF2O14827 1237 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 MCF2LO15068 1137 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 EIF3HO15372 352 aaKnown RBP eCLIP27.71■■■□□ 2.03
COL13A1-210ENST00000517713 ACLYP53396 1101 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms