RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CLEC3AO75596 197 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 STBD1O95210 358 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 LYPLA2O95372 231 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 CHRNA1P02708 482 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 RPLP2P05387 115 aaKnown RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 ACTN1P12814 892 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 XRCC6P12956 609 aaKnown RBP eCLIP2.99□□□□□ -1.93
SKP1-204ENST00000517691 HOXC8P31273 242 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 GBP1P32455 592 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 RFC2P35250 354 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 KCNJ6P48051 423 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 EPHB4P54760 987 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 NLRP11P59045 1033 aaKnown RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 PPP2R2AP63151 447 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 KRT85P78386 507 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 GRIN1Q05586 938 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 EMC2Q15006 297 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 PTPAQ15257 358 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 SHHQ15465 462 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 TERF2Q15554 542 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 TARBP2Q15633 366 aaKnown RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 PDCD2Q16342 344 aaPredicted RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 TRIM71Q2Q1W2 868 aaKnown RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 ANKRD39Q53RE8 183 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 TMEM240Q5SV17 173 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 C9orf50Q5SZB4 431 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 RRAGBQ5VZM2 374 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 CDCA2Q69YH5 1023 aaPredicted RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 ATL3Q6DD88 541 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 TLDC1Q6P9B6 456 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 PSRC1Q6PGN9 363 aaPredicted RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 CYP26C1Q6V0L0 522 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 C16orf59Q7L2K0 433 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 SCUBE1Q8IWY4 988 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 ZBTB34Q8NCN2 500 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 LINC00301Q8NCQ3 95 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 DNAJB8Q8NHS0 232 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 KCNG4Q8TDN1 519 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 TCP11Q8WWU5 503 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 PRPF31Q8WWY3 499 aaKnown RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 PSPC1Q8WXF1 523 aaKnown RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 SEPT8Q92599 483 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 KIAA1191Q96A73 305 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 EPSTI1Q96J88 318 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 CHAMP1Q96JM3 812 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 AK8Q96MA6 479 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 NLRP4Q96MN2 994 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 ACO2Q99798 780 aaKnown RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 GDF15Q99988 308 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 NT5C3AQ9H0P0 336 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 MTIF3Q9H2K0 278 aaKnown RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 BHMT2Q9H2M3 363 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 ATP6V0A4Q9HBG4 840 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 POLD4Q9HCU8 107 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 ITM2CQ9NQX7 267 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 C1orf112Q9NSG2 853 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 FAM105AQ9NUU6 356 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 PDP2Q9P2J9 529 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 CCDC39Q9UFE4 941 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 DBR1Q9UK59 544 aaKnown RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 AP4E1Q9UPM8 1137 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 SRPRBQ9Y5M8 271 aaKnown RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 TRPV2Q9Y5S1 764 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 ACTL7BQ9Y614 415 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 RBBP6Q7Z6E9 1792 aaKnown RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 LRRC37A2A6NM11 1700 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 MCM3APO60318 1980 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 KDM3AQ9Y4C1 1321 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 A0A087WZ62 844 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 DENND3A2RUS2 1198 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 BLACEA4D250 179 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 GOLGA6L4A6NEF3 574 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 AREL1O15033 823 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CUTAO60888 179 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 GPR32O75388 356 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CSDE1O75534 798 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 RPS6KA5O75582 802 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 YEATS4O95619 227 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 PFKMP08237 780 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 PLA2G4BP0C869 781 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 MTHFD1P11586 935 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 ATP1A3P13637 1013 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 RAC2P15153 192 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 ATP2A2P16615 1042 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 ABCB4P21439 1286 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 MUTP22033 750 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 FGFR4P22455 802 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CD52P31358 61 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 BMP8BP34820 402 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 STAT6P42226 847 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 ASPAP45381 313 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 RARRES1P49788 294 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 FXR1P51114 621 aaKnown RBP eCLIP2.98□□□□□ -1.93
SKP1-204ENST00000517691 SCNN1BP51168 640 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 ZNF131P52739 623 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CRYBB1P53674 252 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 BPIFB3P59826 476 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CDC42EP1Q00587 391 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 LAMTOR4Q0VGL1 99 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 KLF1Q13351 362 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms