RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 NSMCE4AQ9NXX6 385 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 SAC3D1A6NKF1 404 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 PQBP1O60828 265 aaKnown RBP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 FBXO21O94952 628 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 ASMTLO95671 621 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 MYBPC2Q14324 1141 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 NAB2Q15742 525 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 C10orf120Q5SQS8 335 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 NT5DC4Q86YG4 428 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 RCOR2Q8IZ40 523 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZCCHC7Q8N3Z6 543 aaKnown RBP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 ANKS1AQ92625 1134 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 APBA2Q99767 749 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 COMMD3-BMI1R4GMX3 469 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 NBNO60934 754 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 SPAG6O75602 509 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 SRP72O76094 671 aaKnown RBP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 PSEN2P49810 448 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 ANTXR2P58335 489 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 OTUD4Q01804 1114 aaKnown RBP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 MFSD10Q14728 455 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 UGP2Q16851 508 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 AASDHQ4L235 1098 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 CTXN3Q4LDR2 81 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 PID1Q7Z2X4 250 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 TRIM69Q86WT6 500 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 E2F7Q96AV8 911 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 UNC45AQ9H3U1 944 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 EXOSC4Q9NPD3 245 aaKnown RBP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 LOC100653049A0A140TA62 436 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 A0A1W2PQJ5 194 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 TMEM191CA6NGB0 347 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 SMAPO00193 183 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 DNALI1O14645 258 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 KRT34O76011 436 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 PDGFRBP09619 1106 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 MAGEA4P43358 317 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 B3GNT6Q6ZMB0 384 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 SKA1Q96BD8 255 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 CNDP1Q96KN2 507 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 EPS8L2Q9H6S3 715 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 CYP3A43Q9HB55 503 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 CDY2AQ9Y6F7 541 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 CDY1Q9Y6F8 540 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 SLC30A1Q9Y6M5 507 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 MAP2K7O14733 419 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 TNFAIP8O95379 198 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 BCL10O95999 233 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 SHMT1P34896 483 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 ALDH5A1P51649 535 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 NPEPPSP55786 919 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 VGLL4Q14135 290 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 TJAP1Q5JTD0 557 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 IL31Q6EBC2 164 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 TAS2R42Q7RTR8 314 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 ANKMY2Q8IV38 441 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 OR6P1Q8NGX9 317 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 CDC26Q8NHZ8 85 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 SEZ6LQ9BYH1 1024 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 DMGDHQ9UI17 866 aaKnown RBP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 NEU2Q9Y3R4 380 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 TRPV2Q9Y5S1 764 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 SRRM3A6NNA2 597 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 WASHC5Q12768 1159 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 GRIK4Q16099 956 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 APOBEC3HQ6NTF7 200 aaKnown RBP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 ARID3BQ8IVW6 561 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 ADSSL1Q8N142 457 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 SNX19Q92543 992 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 MCRS1Q96EZ8 462 aa12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 EML4Q9HC35 981 aaKnown RBP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.68□□□□□ -0.38
PCDHGA6-201ENST00000517434 MFN2O95140 757 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 PARNO95453 639 aaKnown RBP12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 AVPR1AP37288 418 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 POU5F1BQ06416 359 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 PDK1Q15118 436 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 MTHFD1LQ6UB35 978 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 SENP7Q9BQF6 1050 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 DFFAO00273 331 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 USP1O94782 785 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 LCA5LO95447 670 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 GALCP54803 685 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 KCNMA1Q12791 1236 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 MAP2K5Q13163 448 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 ANKS3Q6ZW76 656 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 ARL10Q8N8L6 244 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 PPHLN1Q8NEY8 458 aaKnown RBP12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 AGR3Q8TD06 166 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 SYT17Q9BSW7 474 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 RNPEPQ9H4A4 650 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 KCNQ5Q9NR82 932 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 ABI2Q9NYB9 513 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 ATXN10Q9UBB4 475 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 GSNP06396 782 aa12.67□□□□□ -0.38
PCDHGA6-201ENST00000517434 HIST1H2AGP0C0S8 130 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms