RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 NCOA4Q13772 614 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 CRY1Q16526 586 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 PREPLQ4J6C6 727 aaPredicted RBP15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 EOGTQ5NDL2 527 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 HECTD3Q5T447 861 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 SNX30Q5VWJ9 437 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 RESP18Q5W5W9 173 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 ANO7Q6IWH7 933 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 CYP2U1Q7Z449 544 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 SLC9A9Q8IVB4 645 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 PARD3BQ8TEW8 1205 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 SNX21Q969T3 373 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 SPACA7Q96KW9 195 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 LSM14BQ9BX40 385 aaKnown RBP15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TPSD1Q9BZJ3 242 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 ARHGEF4Q9NR80 690 aa15.5■□□□□ 0.07
SCARNA20.5-201ENST00000516991 PLXND1Q9Y4D7 1925 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 ABCA7Q8IZY2 2146 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 COCHO43405 550 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 KAT7O95251 611 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 F13A1P00488 732 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TRIM21P19474 475 aaKnown RBP15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 CASP1P29466 404 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 PMLP29590 882 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 GRIA2P42262 883 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 AFMP43652 599 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 SLC5A3P53794 718 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 CLDN10P78369 228 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 SHC2P98077 582 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 CUL4BQ13620 913 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 ST3GAL2Q16842 350 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 BTBD8Q5XKL5 378 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TCEAL6Q6IPX3 200 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 SCARA5Q6ZMJ2 495 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 CCDC33Q8N5R6 958 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 MDGA1Q8NFP4 955 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 WHAMMQ8TF30 809 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TMEM174Q8WUU8 243 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TCEAL3Q969E4 200 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 POLMQ9NP87 494 aaPredicted RBP15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 EXOC1Q9NV70 894 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 CFAP45Q9UL16 551 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 SH3BP1Q9Y3L3 701 aa15.49■□□□□ 0.07
SCARNA20.5-201ENST00000516991 MYOFQ9NZM1 2061 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 MYH10P35580 1976 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 LRRIQ3A6PVS8 624 aaPredicted RBP15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TNFRSF10BO14763 440 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 KHNYNO15037 678 aaKnown RBP15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 HOXC11O43248 304 aaPredicted RBP15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 KLF8O95600 359 aaPredicted RBP15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 HSP90AA1P07900 732 aaKnown RBP15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 SLFN14P0C7P3 912 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TNFRSF4P43489 277 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 CASP4P49662 377 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 GAD2Q05329 585 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 BYSLQ13895 437 aaKnown RBP15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 LY6G5CQ5SRR4 150 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 N4BP2L1Q5TBK1 243 aaPredicted RBP15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 FOXD4L5Q5VV16 416 aaPredicted RBP15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 DAB2IPQ5VWQ8 1189 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 RHBDF2Q6PJF5 856 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 NUDT18Q6ZVK8 323 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TRMT11Q7Z4G4 463 aaKnown RBP15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 HSCBQ8IWL3 235 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 ALLCQ8N6M5 410 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 IL17RCQ8NAC3 791 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 OLIG1Q8TAK6 271 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 PLEKHO2Q8TD55 490 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 FOXD4L4Q8WXT5 416 aaPredicted RBP15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TAF4BQ92750 862 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 CHAMP1Q96JM3 812 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 ZFRQ96KR1 1074 aaKnown RBP15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 FBXO44Q9H4M3 255 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 KRT82Q9NSB4 513 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 DMAC2Q9NW81 257 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 IL37Q9NZH6 218 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 PCDHA7Q9UN72 937 aa15.48■□□□□ 0.07
SCARNA20.5-201ENST00000516991 A0A0A0MRY4 1105 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 LNP1A1A4G5 178 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 FAM92AA1XBS5 289 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 SCAMP3O14828 347 aaKnown RBP15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 AP1G2O75843 785 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 KCNK5O95279 499 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 C4BPAP04003 597 aaKnown RBP15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 RPN1P04843 607 aaKnown RBP15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 ZDHHC11BP0C7U3 371 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 CHRM1P11229 460 aaPredicted RBP15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TIE1P35590 1138 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 DPP6P42658 865 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 KIR2DL1P43626 348 aaPredicted RBP15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 CDH8P55286 799 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 KDSRQ06136 332 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 SGSM1Q2NKQ1 1148 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 LPCAT2Q7L5N7 544 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 UNC93AQ86WB7 457 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 C12orf40Q86WS4 652 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TTC30AQ86WT1 665 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 FUKQ8N0W3 1084 aa15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TXNDC5Q8NBS9 432 aaKnown RBP15.47■□□□□ 0.07
SCARNA20.5-201ENST00000516991 TMC2Q8TDI7 906 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms