RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ZNF559Q9BR84 538 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 BDH2Q9BUT1 245 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 ACE2Q9BYF1 805 aaPredicted RBP3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 ASPSCR1Q9BZE9 553 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 CRNKL1Q9BZJ0 848 aaKnown RBP3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 RWDD1Q9H446 243 aaPredicted RBP3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 EPB41L5Q9HCM4 733 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 ERAP1Q9NZ08 941 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 CEP72Q9P209 647 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 EDARQ9UNE0 448 aa3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 OAS3Q9Y6K5 1087 aaKnown RBP3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 NUP210Q8TEM1 1887 aaPredicted RBP3.53□□□□□ -1.84
SCARNA13-201ENST00000516672 CSMD3Q7Z407 3707 aa3.53□□□□□ -1.85
SCARNA13-201ENST00000516672 TP53BP1Q12888 1972 aaPredicted RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 MYO18AQ92614 2054 aaKnown RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 A0A1W2PQF6 199 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 STMND1H3BQB6 276 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 CAPN5O15484 640 aaPredicted RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 GPR32O75388 356 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 ITIH1P19827 911 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 MCCP23508 829 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 ITGB7P26010 798 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 CD82P27701 267 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 HNRNPH3P31942 346 aaKnown RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 OPRD1P41143 372 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 WASP42768 502 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 TFCP2Q12800 502 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 EIF3IQ13347 325 aaKnown RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 OS9Q13438 667 aaPredicted RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 CDSNQ15517 529 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 NFKBIBQ15653 356 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 LONRF1Q17RB8 773 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 C8orf34Q49A92 452 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 TNNI3KQ59H18 835 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 RRP12Q5JTH9 1297 aaKnown RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 CCDC158Q5M9N0 1113 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 C12orf60Q5U649 245 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 RCSD1Q6JBY9 416 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 XKRXQ6PP77 449 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 CRTC1Q6UUV9 634 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 RPTNQ6XPR3 784 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 IQCKQ8N0W5 287 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 RHPN1Q8TCX5 695 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 SDR42E1Q8WUS8 393 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 PTCD2Q8WV60 388 aaKnown RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 PNPLA2Q96AD5 504 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 RMND5BQ96G75 393 aaPredicted RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 Q96MF0 132 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 COLEC11Q9BWP8 271 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 LRRCC1Q9C099 1032 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 NEUROD4Q9HD90 331 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 PIH1D3Q9NQM4 214 aaKnown RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 PXMP2Q9NR77 195 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 DACT1Q9NYF0 836 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 GGT7Q9UJ14 662 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 PA2G4Q9UQ80 394 aaKnown RBP3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 INSL5Q9Y5Q6 135 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 FRAS1Q86XX4 4008 aa3.52□□□□□ -1.85
SCARNA13-201ENST00000516672 EVPLQ92817 2033 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 SCN8AQ9UQD0 1980 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 FRMD3A2A2Y4 597 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 TRIM64A6NGJ6 449 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 TRIM64BA6NI03 449 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 ELOA3DA6NLF2 546 aaPredicted RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 KCNJ18B7U540 433 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 C9orf172C9J069 976 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 LINC01387J3KSC0 135 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 M0R2C6 588 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 VILLO15195 856 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 CASC3O15234 703 aaKnown RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 SDC3O75056 442 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 TCEA3O75764 348 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 ZWINTO95229 277 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 CLDN14O95500 239 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 TTLL1O95922 423 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 PGRP06401 933 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 P4HBP07237 508 aaKnown RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 ATP5JP18859 108 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 FGFR4P22455 802 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 ELF1P32519 619 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 TCF7P36402 384 aaPredicted RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 TNFRSF4P43489 277 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 MESP2Q0VG99 397 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 ORC1Q13415 861 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 NEDD9Q14511 834 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 GSE1Q14687 1217 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 PDGFRLQ15198 375 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 TTF1Q15361 905 aaPredicted RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 BMT2Q1RMZ1 405 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 ELOA3BQ3SY89 546 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 HS1BP3Q53T59 392 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 HEPHL1Q6MZM0 1159 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 CC2D1AQ6P1N0 951 aaPredicted RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 KLHDC10Q6PID8 442 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 PADI6Q6TGC4 694 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 CCBE1Q6UXH8 406 aaPredicted RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 SMC5Q8IY18 1101 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 ELOA3Q8NG57 546 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 396.4 ms