RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 HTRA4P83105 476 aaPredicted RBP3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 LMAN2Q12907 356 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 LARS2Q15031 903 aaKnown RBP3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ANO6Q4KMQ2 910 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 TMEM65Q6PI78 240 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 VSTM1Q6UX27 236 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 DEF8Q6ZN54 512 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ZDHHC17Q8IUH5 632 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 SAMD14Q8IZD0 417 aaPredicted RBP3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 NRACQ8N912 160 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PNISRQ8TF01 805 aaKnown RBP3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 SPSB4Q96A44 273 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 SUCLG2Q96I99 432 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 VN1R3Q9BXE9 311 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ADGRE3Q9BY15 652 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 RHOBTB2Q9BYZ6 727 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 A1CFQ9NQ94 594 aaKnown RBP3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 XPNPEP3Q9NQH7 507 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 MTMR4Q9NYA4 1195 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 CDY1Q9Y6F8 540 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ZMYM2Q9UBW7 1377 aa3.15□□□□□ -1.9
SCARNA16.2-201ENST00000516520 MBD3L4A6NDZ8 208 aaPredicted RBP3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MBD3L3A6NE82 208 aaPredicted RBP3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 H3BNC9 293 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CCP110O43303 1012 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 SRGAP2O75044 1071 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ALDH1L1O75891 902 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 KITP10721 976 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 APEHP13798 732 aaKnown RBP3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 KLRC1P26715 233 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CCKBRP32239 447 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 AGFG1P52594 562 aaKnown RBP3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 COPB1P53618 953 aaKnown RBP3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ID2Q02363 134 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 SRSF1Q07955 248 aaKnown RBP eCLIP3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 DCAF12L1Q5VU92 463 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 DCDC5Q6ZRR9 648 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 LINC01465Q8N7H1 131 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 DNAJB14Q8TBM8 379 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MAP4K1Q92918 833 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 VCPIP1Q96JH7 1222 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 HS6ST2Q96MM7 605 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 SIGLEC11Q96RL6 698 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ACO2Q99798 780 aaKnown RBP3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TRIM5Q9C035 493 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ZMAT3Q9HA38 289 aaKnown RBP3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 SMURF2Q9HAU4 748 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 GAR1Q9NY12 217 aaKnown RBP3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ZNF180Q9UJW8 692 aa3.15□□□□□ -1.91
SCARNA16.2-201ENST00000516520 LY6G6EA0A0G2JKS1 128 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 LOC102723971A0A1B0GUV8 181 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ADAM10O14672 748 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CD3EAPO15446 510 aaKnown RBP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 RGS10O43665 173 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 RASAL1O95294 804 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 U2AF1L5P0DN76 240 aaPredicted RBP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 PRF1P14222 555 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CREB1P16220 341 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 SLC7A1P30825 629 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 UQCRC1P31930 480 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 DIO1P49895 249 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TIRAPP58753 221 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 RPS13P62277 151 aaKnown RBP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 U2AF1Q01081 240 aaKnown RBP eCLIP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TIAL1Q01085 375 aaKnown RBP eCLIP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ZNF91Q05481 1191 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 KCNB1Q14721 858 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TTF1Q15361 905 aaPredicted RBP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 PTCHD3Q3KNS1 767 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 KLHL22Q53GT1 634 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CACHD1Q5VU97 1274 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 B3GNT9Q6UX72 402 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 IRF2BP2Q7Z5L9 587 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ANKRD13BQ86YJ7 626 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 LIX1LQ8IVB5 337 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 C16orf71Q8IYS4 520 aaPredicted RBP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MAFAQ8NHW3 353 aaPredicted RBP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 PPP1R35Q8TAP8 253 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 SLC35G2Q8TBE7 412 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 SMCR8Q8TEV9 937 aaPredicted RBP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 JPH3Q8WXH2 748 aaPredicted RBP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ZNF668Q96K58 619 aaPredicted RBP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 NT5C1BQ96P26 610 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TAAR9Q96RI9 348 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ZCWPW1Q9H0M4 648 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 DNMT3BQ9UBC3 853 aaKnown RBP3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 MGAT4CQ9UBM8 478 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ZNF580Q9UK33 172 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 FER1L4A9Z1Z3 1794 aa3.14□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CAPN8A6NHC0 703 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TMEM233B4DJY2 109 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 FAM227AF5H4B4 570 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CNOT3O75175 753 aaKnown RBP3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 RFPL1O75677 317 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 TUSC2O75896 110 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CD19P15391 556 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 CCKARP32238 428 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 THBS4P35443 961 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 ANAPC15P60006 121 aa3.13□□□□□ -1.91
SCARNA16.2-201ENST00000516520 HSF1Q00613 529 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms