RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TIAL1Q01085 375 aaKnown RBP eCLIP3.93□□□□□ -1.78
HERC4-215ENST00000515753 FHL1Q13642 323 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 SLC9A4Q6AI14 798 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 SLC18B1Q6NT16 456 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 SESTD1Q86VW0 696 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 ABRAQ8N0Z2 381 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 DENND1AQ8TEH3 1009 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 OSCP1Q8WVF1 389 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 GLG1Q92896 1179 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 STRBPQ96SI9 672 aaKnown RBP3.93□□□□□ -1.78
HERC4-215ENST00000515753 TRIM5Q9C035 493 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 UNKQ9C0B0 810 aaKnown RBP3.93□□□□□ -1.78
HERC4-215ENST00000515753 SPRTNQ9H040 489 aaPredicted RBP3.93□□□□□ -1.78
HERC4-215ENST00000515753 NUP62CLQ9H1M0 184 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 FAM83DQ9H4H8 585 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 TRIM36Q9NQ86 728 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 CPNE7Q9UBL6 633 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 OGDHLQ9ULD0 1010 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 CAPN11Q9UMQ6 739 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 TBC1D30Q9Y2I9 924 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 A1L4Q6 167 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 TMEM233B4DJY2 109 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 hCG_1984214I3L0E3 225 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 ZNF213O14771 459 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 INMTO95050 263 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 PRKCBP05771 671 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 PDHA1P08559 390 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 DLDP09622 509 aaKnown RBP3.92□□□□□ -1.78
HERC4-215ENST00000515753 NDUFB7P17568 137 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 ACVR2AP27037 513 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 CLCN2P51788 898 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 TPTEP56180 551 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 RPS16P62249 146 aaKnown RBP3.92□□□□□ -1.78
HERC4-215ENST00000515753 SP2Q02086 613 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 BIRC2Q13490 618 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 HDAC1Q13547 482 aaPredicted RBP3.92□□□□□ -1.78
HERC4-215ENST00000515753 UBE4AQ14139 1066 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 PROSER3Q2NL68 480 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 TREML2Q5T2D2 321 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 MORN5Q5VZ52 161 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 CEP85Q6P2H3 762 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 TECPR1Q7Z6L1 1165 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 WDR75Q8IWA0 830 aaKnown RBP3.92□□□□□ -1.78
HERC4-215ENST00000515753 IZUMO1Q8IYV9 350 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 MPP5Q8N3R9 675 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 PHKBQ93100 1093 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 REPS1Q96D71 796 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 ZNF668Q96K58 619 aaPredicted RBP3.92□□□□□ -1.78
HERC4-215ENST00000515753 RPS6KC1Q96S38 1066 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 THAP7Q9BT49 309 aaPredicted RBP3.92□□□□□ -1.78
HERC4-215ENST00000515753 ZNF287Q9HBT7 754 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 DUSP22Q9NRW4 184 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 MRPS17Q9Y2R5 130 aaKnown RBP3.92□□□□□ -1.78
HERC4-215ENST00000515753 SNX14Q9Y5W7 946 aa3.92□□□□□ -1.78
HERC4-215ENST00000515753 TISP43B9A030 160 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 H7C1Q1 480 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 PPP6CO00743 305 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 CD3EAPO15446 510 aaKnown RBP3.91□□□□□ -1.78
HERC4-215ENST00000515753 RRP9O43818 475 aaKnown RBP3.91□□□□□ -1.78
HERC4-215ENST00000515753 NTN1O95631 604 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 KRT18P05783 430 aaKnown RBP3.91□□□□□ -1.78
HERC4-215ENST00000515753 SFPQP23246 707 aaKnown RBP eCLIP3.91□□□□□ -1.78
HERC4-215ENST00000515753 CCT4P50991 539 aaKnown RBP3.91□□□□□ -1.78
HERC4-215ENST00000515753 EEFSECP57772 596 aaKnown RBP3.91□□□□□ -1.78
HERC4-215ENST00000515753 HTRA4P83105 476 aaPredicted RBP3.91□□□□□ -1.78
HERC4-215ENST00000515753 CCNIQ14094 377 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 ARHGEF7Q14155 803 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 NPY5RQ15761 445 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 PRAMEF17Q5VTA0 474 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 FCRL6Q6DN72 434 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 Q6ZWC4 215 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 PARS2Q7L3T8 475 aaKnown RBP3.91□□□□□ -1.78
HERC4-215ENST00000515753 YAF2Q8IY57 180 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 IPCEF1Q8WWN9 437 aaPredicted RBP3.91□□□□□ -1.78
HERC4-215ENST00000515753 RAPGEF4Q8WZA2 1011 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 TIFAQ96CG3 184 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 WACQ9BTA9 647 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 SARGQ9BW04 601 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 COLEC11Q9BWP8 271 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 BRIP1Q9BX63 1249 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 SEMA4CQ9C0C4 833 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 SACM1LQ9NTJ5 587 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 ELOVL5Q9NYP7 299 aa3.91□□□□□ -1.78
HERC4-215ENST00000515753 FER1L4A9Z1Z3 1794 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 AQP7P3A6NL99 342 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 CLCA1A8K7I4 914 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 JTBO76095 146 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 TOP3BO95985 862 aaKnown RBP3.9□□□□□ -1.79
HERC4-215ENST00000515753 MYL1P05976 194 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 FESP07332 822 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 NPSP0C0P6 89 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 FAM163BP0C2L3 166 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 TRIM27P14373 513 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 PHKG2P15735 406 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 CERS1P27544 350 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 ADORA2AP29274 412 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 EPHA3P29320 983 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 CPT1AP50416 773 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 PRKAG1P54619 331 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 OS9Q13438 667 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms