RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 NBPF12Q5TAG4 269 aaPredicted RBP17.53■□□□□ 0.4
TSPAN17-209ENST00000515708 CDHR3Q6ZTQ4 885 aa17.53■□□□□ 0.4
TSPAN17-209ENST00000515708 SLC26A11Q86WA9 606 aa17.53■□□□□ 0.4
TSPAN17-209ENST00000515708 WDR60Q8WVS4 1066 aa17.53■□□□□ 0.4
TSPAN17-209ENST00000515708 NRG4Q8WWG1 115 aa17.53■□□□□ 0.4
TSPAN17-209ENST00000515708 FAM136AQ96C01 138 aa17.53■□□□□ 0.4
TSPAN17-209ENST00000515708 YIPF3Q9GZM5 350 aa17.53■□□□□ 0.4
TSPAN17-209ENST00000515708 NMUR2Q9GZQ4 415 aa17.53■□□□□ 0.4
TSPAN17-209ENST00000515708 VPS33BQ9H267 617 aa17.53■□□□□ 0.4
TSPAN17-209ENST00000515708 AS3MTQ9HBK9 375 aa17.53■□□□□ 0.4
TSPAN17-209ENST00000515708 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.53■□□□□ 0.4
TSPAN17-209ENST00000515708 COPEO14579 308 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 FAM155BO75949 473 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 TNNC2P02585 160 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 C1QAP02745 245 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 PRKCBP05771 671 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 SRGAP2CP0DJJ0 459 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 PTPRAP18433 802 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 ORC1Q13415 861 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 WDR78Q5VTH9 848 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 FAM91A1Q658Y4 838 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 PEBP4Q96S96 227 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 IQCGQ9H095 443 aaKnown RBP17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 PNPLA8Q9NP80 782 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 ARMCX1Q9P291 453 aa17.52■□□□□ 0.4
TSPAN17-209ENST00000515708 TRIM49D1C9J1S8 452 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 CAPN9O14815 690 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 CHADO15335 359 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 FARP2O94887 1054 aaPredicted RBP17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 PSMG1O95456 288 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 TUBP50607 506 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 STAT5BP51692 787 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 CDH8P55286 799 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 SARNPP82979 210 aaKnown RBP17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 OCRLQ01968 901 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 ACAP1Q15027 740 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 FAM182AQ5T1J6 154 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 TTC39BQ5VTQ0 682 aaPredicted RBP17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 FAF2Q96CS3 445 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 C12orf42Q96LP6 360 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 ARHGEF4Q9NR80 690 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 TTLL3Q9Y4R7 772 aa17.52■□□□□ 0.39
TSPAN17-209ENST00000515708 TBX10O75333 385 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 ENDOD1O94919 500 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 ZBTB7AO95365 584 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 CNTN2Q02246 1040 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 SLC34A1Q06495 639 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 ALYREFQ86V81 257 aaKnown RBP17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 PPM1NQ8N819 430 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 RNF149Q8NC42 400 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 MCRS1Q96EZ8 462 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 CFAP36Q96G28 342 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 ANKRD36BP1Q96IX9 119 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 SYT15Q9BQS2 421 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 BCO2Q9BYV7 579 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 KAT6AQ92794 2004 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 KLHL33A6NCF5 533 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 B4GALT4O60513 344 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 KRT19P08727 400 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 CDH6P55285 790 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 OSTNP61366 133 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 YWHAZP63104 245 aaKnown RBP17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 LAMTOR4Q0VGL1 99 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 LBRQ14739 615 aaKnown RBP17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 SMYD5Q6GMV2 418 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 CTAGE3PQ8IX95 158 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 SLC4A11Q8NBS3 891 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 SCG3Q8WXD2 468 aaKnown RBP17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 TWNKQ96RR1 684 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 LBHD1Q9BQE6 289 aaPredicted RBP17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 RAB6BQ9NRW1 208 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 ASNSD1Q9NWL6 643 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 STX18Q9P2W9 335 aaKnown RBP17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 LRCH1Q9Y2L9 728 aa17.51■□□□□ 0.39
TSPAN17-209ENST00000515708 MGAMO43451 1857 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 CBLBQ13191 982 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 ZNF667Q5HYK9 610 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 SH3PXD2AQ5TCZ1 1133 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 LRRC74BQ6ZQY2 392 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 CYP4V2Q6ZWL3 525 aaPredicted RBP17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 ZBTB8OSQ8IWT0 167 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 DNERQ8NFT8 737 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 ZNF483Q8TF39 744 aaPredicted RBP17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 STMN2Q93045 179 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 C7orf26Q96N11 449 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 MECRQ9BV79 373 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 SDCBP2Q9H190 292 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 USP29Q9HBJ7 922 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 PICK1Q9NRD5 415 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 KCNK4Q9NYG8 393 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 HMGXB4Q9UGU5 601 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 PLLPQ9Y342 182 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 ANK1P16157 1881 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 CXorf49A8MYA2 514 aaPredicted RBP17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 H7C0C1 242 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 KRT37O76014 449 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 SNRPAP09012 282 aaKnown RBP17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 GABRB2P47870 512 aa17.5■□□□□ 0.39
TSPAN17-209ENST00000515708 ATP5OP48047 213 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms