RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 DDX1Q92499 740 aaKnown RBP12.54□□□□□ -0.4
SNF8-215ENST00000515572 MCRS1Q96EZ8 462 aa12.54□□□□□ -0.4
SNF8-215ENST00000515572 NOX5Q96PH1 765 aa12.54□□□□□ -0.4
SNF8-215ENST00000515572 TRIM5Q9C035 493 aa12.54□□□□□ -0.4
SNF8-215ENST00000515572 CNGB3Q9NQW8 809 aa12.54□□□□□ -0.4
SNF8-215ENST00000515572 IGSF9Q9P2J2 1179 aa12.54□□□□□ -0.4
SNF8-215ENST00000515572 NOCTQ9UK39 431 aaKnown RBP12.54□□□□□ -0.4
SNF8-215ENST00000515572 TRAV19A0A0A6YYK7 116 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 LRRC53A6NM62 1247 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 ANHXE9PGG2 379 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 TULP2O00295 520 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 NRG2O14511 850 aaPredicted RBP12.53□□□□□ -0.4
SNF8-215ENST00000515572 FBXO21O94952 628 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 LSM8O95777 96 aaKnown RBP12.53□□□□□ -0.4
SNF8-215ENST00000515572 ZBED1O96006 694 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 TPM1P09493 284 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 ZDHHC11BP0C7U3 371 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 SSTR3P32745 418 aaPredicted RBP12.53□□□□□ -0.4
SNF8-215ENST00000515572 RPL34P49207 117 aaKnown RBP12.53□□□□□ -0.4
SNF8-215ENST00000515572 CYP4F8P98187 520 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 ADIGQ0VDE8 80 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 SFMBT2Q5VUG0 894 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 PM20D1Q6GTS8 502 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 PMF1Q6P1K2 205 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 TRIM72Q6ZMU5 477 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 TMEM35BQ8NCS4 154 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 ZSCAN18Q8TBC5 510 aaPredicted RBP12.53□□□□□ -0.4
SNF8-215ENST00000515572 SYN2Q92777 582 aaPredicted RBP12.53□□□□□ -0.4
SNF8-215ENST00000515572 SMARCD2Q92925 531 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 E2F7Q96AV8 911 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 ASB16Q96NS5 453 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 UHRF1Q96T88 793 aaPredicted RBP12.53□□□□□ -0.4
SNF8-215ENST00000515572 SLC4A5Q9BY07 1137 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 TRPV4Q9HBA0 871 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 AIPL1Q9NZN9 384 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 GMIPQ9P107 970 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 CAPN11Q9UMQ6 739 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 XIRP2A4UGR9 3374 aa12.53□□□□□ -0.4
SNF8-215ENST00000515572 SART1O43290 800 aaKnown RBP12.52□□□□□ -0.41
SNF8-215ENST00000515572 ABL1P00519 1130 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 GYPCP04921 128 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 CFHP08603 1231 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 USP17L7P0C7H9 530 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 CDH5P33151 784 aaPredicted RBP12.52□□□□□ -0.41
SNF8-215ENST00000515572 AVPR1AP37288 418 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 RGS7P49802 495 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 ZBED6P86452 979 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 ARID5AQ03989 594 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 PDCLQ13371 301 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 ASIC2Q16515 512 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 FAM78AQ5JUQ0 283 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 STXBP5Q5T5C0 1151 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 TXNDC8Q6A555 127 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 TMEM110Q86TL2 294 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 PASD1Q8IV76 773 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 VSTM4Q8IW00 320 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 CMTM8Q8IZV2 173 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 MAB21L3Q8N8X9 362 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 IRGQQ8WZA9 623 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 ZSWIM3Q96MP5 696 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 SLC46A2Q9BY10 475 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 ULBP1Q9BZM6 244 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 ZFP14Q9HCL3 533 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 TRPC7Q9HCX4 862 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 CLIC5Q9NZA1 410 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 LIMD1Q9UGP4 676 aa12.52□□□□□ -0.41
SNF8-215ENST00000515572 CHORDC1Q9UHD1 332 aaPredicted RBP12.52□□□□□ -0.41
SNF8-215ENST00000515572 LUC7L2Q9Y383 392 aaKnown RBP12.52□□□□□ -0.41
SNF8-215ENST00000515572 MYO10Q9HD67 2058 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 C2orf78A6NCI8 922 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 ECI2O75521 394 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 OLFM2O95897 454 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 OAS1P00973 400 aaKnown RBP12.51□□□□□ -0.41
SNF8-215ENST00000515572 CKMP06732 381 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 MMEP08473 750 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 LCP1P13796 627 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 HDCP19113 662 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 HTR4Q13639 388 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 ZNF268Q14587 947 aaPredicted RBP12.51□□□□□ -0.41
SNF8-215ENST00000515572 HECTD3Q5T447 861 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 TAF3Q5VWG9 929 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 IRF2BP2Q7Z5L9 587 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 TADA2BQ86TJ2 420 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 ZNF276Q8N554 614 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 WDTC1Q8N5D0 677 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 MSANTD4Q8NCY6 345 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 C1orf131Q8NDD1 294 aaKnown RBP12.51□□□□□ -0.41
SNF8-215ENST00000515572 SLC20A1Q8WUM9 679 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 ELSPBP1Q96BH3 223 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 MRFAP1L1Q96HT8 127 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 PPP1R13BQ96KQ4 1090 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 CDK5RAP1Q96SZ6 601 aaKnown RBP12.51□□□□□ -0.41
SNF8-215ENST00000515572 TRIM62Q9BVG3 475 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 MIS12Q9H081 205 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 KIF9Q9HAQ2 790 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 ST7Q9NRC1 585 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 OBP2AQ9NY56 170 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 CYTH4Q9UIA0 394 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 NAGPAQ9UK23 515 aa12.51□□□□□ -0.41
SNF8-215ENST00000515572 C5orf42Q9H799 3197 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms