RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 TRIM68Q6AZZ1 485 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 TMEM214Q6NUQ4 689 aaKnown RBP9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 ZNF720Q7Z2F6 126 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 CACNA2D4Q7Z3S7 1137 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 SYCP3Q8IZU3 236 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 TTC16Q8NEE8 873 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 CACTINQ8WUQ7 758 aaKnown RBP9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 GAB3Q8WWW8 586 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 USP13Q92995 863 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 FAM83CQ9BQN1 747 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 FAM213AQ9BRX8 229 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 PI4K2AQ9BTU6 479 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 ARRDC1-AS1Q9H2J1 176 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 HPS4Q9NQG7 708 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 CCL26Q9Y258 94 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 R3HCC1Q9Y3T6 440 aaKnown RBP9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 VPS37CA5D8V6 355 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 TRDMT1O14717 391 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 GCNT3O95395 438 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 LDHAP00338 332 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 KRT19P08727 400 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 TMEM191BP0C7N4 346 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 HMGA1P17096 107 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 GAP43P17677 238 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 DRD1P21728 446 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 ACAT1P24752 427 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 ADSSP30520 456 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 ZNF268Q14587 947 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 PDGFRLQ15198 375 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 DDR2Q16832 855 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 FBXO43Q4G163 708 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 L1TD1Q5T7N2 865 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 TXNDC8Q6A555 127 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 FSTL4Q6MZW2 842 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 PKN3Q6P5Z2 889 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 CRELD2Q6UXH1 353 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 SV2BQ7L1I2 683 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 TMEM150AQ86TG1 271 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 MON1AQ86VX9 555 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 SPATA2LQ8IUW3 424 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 BRSK2Q8IWQ3 736 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 TMEM86AQ8N2M4 240 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 PDCL2Q8N4E4 241 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 CPA6Q8N4T0 437 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 LRRC52Q8N7C0 313 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 FSIP1Q8NA03 581 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 STKLD1Q8NE28 680 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 NOC3LQ8WTT2 800 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 LEO1Q8WVC0 666 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 SAAL1Q96ER3 474 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 EPSTI1Q96J88 318 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 LOXL4Q96JB6 756 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 CHAMP1Q96JM3 812 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 ACCSQ96QU6 501 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 ACBD6Q9BR61 282 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 IKZF4Q9H2S9 585 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 TRPC7Q9HCX4 862 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 ABCB6Q9NP58 842 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 TMLHEQ9NVH6 421 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 DDX43Q9NXZ2 648 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 RBAKQ9NYW8 714 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 TBC1D7Q9P0N9 293 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 L1RE1Q9UN81 338 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 AGAP1Q9UPQ3 857 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 ADAMTS9Q9P2N4 1935 aa9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 TNRC6BQ9UPQ9 1833 aaKnown RBP9.54□□□□□ -0.88
CDC42SE2-212ENST00000515533 PCNX2A6NKB5 2137 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 TRAV19A0A0A6YYK7 116 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 OTOL1A6NHN0 477 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 AKAP3O75969 853 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 EPN2O95208 641 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 EGFP01133 1207 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 USP17L7P0C7H9 530 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 ZNF806P0C7X5 589 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 IDEP14735 1019 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 ARSAP15289 507 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 GARTP22102 1010 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 CYP2F1P24903 491 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 PCSK1P29120 753 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 HOXC13P31276 330 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 IFNAR2P48551 515 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 GPR15P49685 360 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 LIMK1P53667 647 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 FAM160A1Q05DH4 1040 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 PDE4CQ08493 712 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 KCNA1Q09470 495 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 PSMD2Q13200 908 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 ALCAMQ13740 583 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 ELOAQ14241 798 aaKnown RBP9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 KCNB1Q14721 858 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 MTF1Q14872 753 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 SF3A2Q15428 464 aaKnown RBP9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 CCDC6Q16204 474 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 SDHAF4Q5VUM1 108 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 RRAGBQ5VZM2 374 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 USP49Q70CQ1 688 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 KBTBD6Q86V97 674 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 CAMKK1Q8N5S9 505 aa9.53□□□□□ -0.88
CDC42SE2-212ENST00000515533 CSGALNACT2Q8N6G5 542 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms