RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 CALCOCO1Q9P1Z2 691 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 USP18Q9UMW8 372 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 NLRC5Q86WI3 1866 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 PTPRDP23468 1912 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 LRRD1A4D1F6 860 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 YJEFN3A6XGL0 299 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 E7ENQ6 273 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 TTI1O43156 1089 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 TRUB2O95900 331 aaKnown RBP9.59□□□□□ -0.87
CPNE4-213ENST00000515418 PAX3P23760 479 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 SDC4P31431 198 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 KCNJ1P48048 391 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 GUCY2DQ02846 1103 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 CTXN3Q4LDR2 81 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 RTP2Q5QGT7 225 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 LRRC38Q5VT99 294 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 SDHAF4Q5VUM1 108 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 MFSD5Q6N075 450 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 TTC27Q6P3X3 843 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 FUT10Q6P4F1 479 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 SLC26A9Q7LBE3 791 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 ZDHHC17Q8IUH5 632 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 GSPT2Q8IYD1 628 aaKnown RBP9.59□□□□□ -0.87
CPNE4-213ENST00000515418 RCOR2Q8IZ40 523 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 DEFB106AQ8N104 65 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 EXD1Q8NHP7 514 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 ATG4AQ8WYN0 398 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 HSPH1Q92598 858 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 MAGOHBQ96A72 148 aaKnown RBP9.59□□□□□ -0.87
CPNE4-213ENST00000515418 ZBTB9Q96C00 473 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 SLITRK1Q96PX8 696 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 OSBPL8Q9BZF1 889 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 ZCWPW1Q9H0M4 648 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 EPB41L5Q9HCM4 733 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 CSNK1G1Q9HCP0 422 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 GPATCH2LQ9NWQ4 482 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 ABI2Q9NYB9 513 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-213ENST00000515418 RAB21Q9UL25 225 aa9.59□□□□□ -0.87
CPNE4-213ENST00000515418 R3HDM2Q9Y2K5 976 aaKnown RBP9.59□□□□□ -0.87
CPNE4-213ENST00000515418 SYNJ2BP-COX16A0A087WUM0 186 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 ABHD14A-ACY1A0A1B0GW23 586 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 ARHGEF37A1IGU5 675 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 C3orf70A6NLC5 250 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 HEXIM1O94992 359 aaKnown RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 FYNP06241 537 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 FGFR3P22607 806 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 RFC2P35250 354 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 GRIK1P39086 918 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 GPR15P49685 360 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 WDR5P61964 334 aaKnown RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 YWHAZP63104 245 aaKnown RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 IFRD2Q12894 506 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 MRPL58Q14197 206 aaKnown RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 DDR2Q16832 855 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 HADHQ16836 314 aaKnown RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 DCAF6Q58WW2 860 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 ODF2Q5BJF6 829 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 RAB41Q5JT25 222 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 EFHC1Q5JVL4 640 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 SPOUT1Q5T280 376 aaKnown RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 CCDC70Q6NSX1 233 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 PRSS55Q6UWB4 352 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 CCNI2Q6ZMN8 369 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 SPOCD1Q6ZMY3 1216 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 CYP4V2Q6ZWL3 525 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 DDX42Q86XP3 938 aaKnown RBP eCLIP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 SPATA2LQ8IUW3 424 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 LRRC43Q8N309 656 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 TMEM199Q8N511 208 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 TTC9BQ8N6N2 239 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 ATAD1Q8NBU5 361 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 SPATA18Q8TC71 538 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 GPR152Q8TDT2 470 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 UBE2Q2Q8WVN8 375 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 IFT81Q8WYA0 676 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 GDAP1L1Q96MZ0 367 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 PLVAPQ9BX97 442 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 MRPL9Q9BYD2 267 aaKnown RBP9.58□□□□□ -0.88
CPNE4-213ENST00000515418 CYLDQ9NQC7 956 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 CHST7Q9NS84 486 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 COX16Q9P0S2 106 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 STIM2Q9P246 746 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 LCMT1Q9UIC8 334 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 NAALADL1Q9UQQ1 740 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 CDH23Q9H251 3354 aa9.58□□□□□ -0.88
CPNE4-213ENST00000515418 GOLGA6L10A0A0M3HER8 536 aa9.57□□□□□ -0.88
CPNE4-213ENST00000515418 TARSL2A2RTX5 802 aaKnown RBP9.57□□□□□ -0.88
CPNE4-213ENST00000515418 CCDC188H7C350 402 aa9.57□□□□□ -0.88
CPNE4-213ENST00000515418 SYN3O14994 580 aa9.57□□□□□ -0.88
CPNE4-213ENST00000515418 SOAT2O75908 522 aa9.57□□□□□ -0.88
CPNE4-213ENST00000515418 RPL17P18621 184 aaKnown RBP9.57□□□□□ -0.88
CPNE4-213ENST00000515418 KDELR1P24390 212 aa9.57□□□□□ -0.88
CPNE4-213ENST00000515418 PGFP49763 221 aa9.57□□□□□ -0.88
CPNE4-213ENST00000515418 HDAC4P56524 1084 aa9.57□□□□□ -0.88
CPNE4-213ENST00000515418 ACAP1Q15027 740 aa9.57□□□□□ -0.88
CPNE4-213ENST00000515418 MAPRE1Q15691 268 aaKnown RBP9.57□□□□□ -0.88
CPNE4-213ENST00000515418 GLE1Q53GS7 698 aaKnown RBP9.57□□□□□ -0.88
CPNE4-213ENST00000515418 ZC3H12AQ5D1E8 599 aaKnown RBP9.57□□□□□ -0.88
CPNE4-213ENST00000515418 WDR93Q6P2C0 686 aa9.57□□□□□ -0.88
CPNE4-213ENST00000515418 SCN4BQ8IWT1 228 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms