RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 TNFAIP3P21580 790 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 FSHRP23945 695 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 CDC25BP30305 580 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 EIF4A3P38919 411 aaKnown RBP11.93□□□□□ -0.5
HTT-213ENST00000513806 PRKCIP41743 596 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 ITIH3Q06033 890 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 TAF5Q15542 800 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 CLEC16AQ2KHT3 1053 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 RAB41Q5JT25 222 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 TXNDC8Q6A555 127 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 BHLHA9Q7RTU4 235 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 SCUBE3Q8IX30 993 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 OR8K1Q8NGG5 319 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 MCRS1Q96EZ8 462 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 PPP1R13BQ96KQ4 1090 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 SLC22A12Q96S37 553 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 DNAJC7Q99615 494 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.93□□□□□ -0.5
HTT-213ENST00000513806 TTLL2Q9BWV7 592 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 SMG9Q9H0W8 520 aaKnown RBP11.93□□□□□ -0.5
HTT-213ENST00000513806 LHX5Q9H2C1 402 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 LRRC4Q9HBW1 653 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 TRPC7Q9HCX4 862 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 WDR6Q9NNW5 1121 aaKnown RBP11.93□□□□□ -0.5
HTT-213ENST00000513806 OSER1Q9NX31 292 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 THEGQ9P2T0 379 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 COG5Q9UP83 839 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 MRPS23Q9Y3D9 190 aaKnown RBP11.93□□□□□ -0.5
HTT-213ENST00000513806 ASB3Q9Y575 518 aa11.93□□□□□ -0.5
HTT-213ENST00000513806 MYOFQ9NZM1 2061 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 MDM4O15151 490 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 PAPSS1O43252 624 aaPredicted RBP11.92□□□□□ -0.5
HTT-213ENST00000513806 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
HTT-213ENST00000513806 GRAP2O75791 330 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 RTN3O95197 1032 aaPredicted RBP11.92□□□□□ -0.5
HTT-213ENST00000513806 SERPING1P05155 500 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 POU2F2P09086 479 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 UNGP13051 313 aaPredicted RBP11.92□□□□□ -0.5
HTT-213ENST00000513806 MTHFRP42898 656 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 EPHA5P54756 1037 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 SLC8A3P57103 927 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 GPR158Q5T848 1215 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 OR6B2Q6IFH4 312 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 MMS22LQ6ZRQ5 1243 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 FAM183BPQ6ZVS7 135 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 RTL10Q7L3V2 364 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 SCD5Q86SK9 330 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 ZNF677Q86XU0 584 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 SIX6OS1Q8N1H7 587 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 TMEM35BQ8NCS4 154 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 KCTD13Q8WZ19 329 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 RPGRIP1Q96KN7 1286 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 MYRFLQ96LU7 910 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 RIPOR3Q96MK2 946 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 CYP2S1Q96SQ9 504 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 C11orf70Q9BRQ4 267 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 SLC4A5Q9BY07 1137 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 CCSER2Q9H7U1 834 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 IL37Q9NZH6 218 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 SCML2Q9UQR0 700 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 USP3Q9Y6I4 520 aa11.92□□□□□ -0.5
HTT-213ENST00000513806 NCANO14594 1321 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 A0A087X0T9 212 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 YJEFN3A6XGL0 299 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 C2CD4DB7Z1M9 353 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 E7ENQ6 273 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 GOLGA8SH3BPF8 625 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 TBX18O95935 607 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 ZBED1O96006 694 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 FAM228BP0C875 321 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 GBP2P32456 591 aaPredicted RBP11.91□□□□□ -0.5
HTT-213ENST00000513806 CDH5P33151 784 aaPredicted RBP11.91□□□□□ -0.5
HTT-213ENST00000513806 MRE11P49959 708 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 DAOAP59103 153 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 GFPT1Q06210 699 aaPredicted RBP11.91□□□□□ -0.5
HTT-213ENST00000513806 MTF1Q14872 753 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 ERICH1Q86X53 443 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 CNGA4Q8IV77 575 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 NPAS3Q8IXF0 933 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 MAB21L3Q8N8X9 362 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 TTC16Q8NEE8 873 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 EDEM1Q92611 657 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 SYN2Q92777 582 aaPredicted RBP11.91□□□□□ -0.5
HTT-213ENST00000513806 FGF13Q92913 245 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 IQCDQ96DY2 449 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 TRMT2BQ96GJ1 504 aaKnown RBP11.91□□□□□ -0.5
HTT-213ENST00000513806 SLC46A2Q9BY10 475 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 UBXN6Q9BZV1 441 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 NUCKS1Q9H1E3 243 aaKnown RBP11.91□□□□□ -0.5
HTT-213ENST00000513806 PNPLA8Q9NP80 782 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 SPTLC3Q9NUV7 552 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 ADAMTS1Q9UHI8 967 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 NAGPAQ9UK23 515 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 CEP83Q9Y592 693 aa11.91□□□□□ -0.5
HTT-213ENST00000513806 FAM92AA1XBS5 289 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 ZNF840PA6NDX5 716 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 SCAMP3O14828 347 aaKnown RBP11.9□□□□□ -0.5
HTT-213ENST00000513806 CCDC172P0C7W6 258 aa11.9□□□□□ -0.5
HTT-213ENST00000513806 HNRNPH3P31942 346 aaKnown RBP11.9□□□□□ -0.5
HTT-213ENST00000513806 RPL34P49207 117 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms