RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 LRRD1A4D1F6 860 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 H3BQF6 201 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 HCRTO43612 131 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 PRPSAP2O60256 369 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 DAB1O75553 588 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 ITGAVP06756 1048 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 KLRC2P26717 231 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 ADORA2BP29275 332 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 TKTP29401 623 aaKnown RBP8.76□□□□□ -1.01
RNF4-220ENST00000513578 RPL21P46778 160 aaKnown RBP8.76□□□□□ -1.01
RNF4-220ENST00000513578 KCNJ1P48048 391 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 VCPP55072 806 aaKnown RBP8.76□□□□□ -1.01
RNF4-220ENST00000513578 MRPS5P82675 430 aaKnown RBP8.76□□□□□ -1.01
RNF4-220ENST00000513578 CBX1P83916 185 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 KRT17Q04695 432 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 ADCY1Q08828 1119 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 TFDP2Q14188 446 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 SLMAPQ14BN4 828 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 PPP1R7Q15435 360 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 OASLQ15646 514 aaKnown RBP8.76□□□□□ -1.01
RNF4-220ENST00000513578 MAPRE1Q15691 268 aaKnown RBP8.76□□□□□ -1.01
RNF4-220ENST00000513578 PLEKHG4Q58EX7 1191 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 INTS6LQ5JSJ4 861 aaKnown RBP8.76□□□□□ -1.01
RNF4-220ENST00000513578 C1orf53Q5VUE5 145 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 KIAA0319Q5VV43 1072 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 RHBDF2Q6PJF5 856 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 CLEC20AQ6ZU45 233 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 CEP128Q6ZU80 1094 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 BEND5Q7L4P6 421 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 TMC3Q7Z5M5 1100 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 MAP7D3Q8IWC1 876 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 SCUBE3Q8IX30 993 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 URGCPQ8TCY9 931 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 LINC01599Q8WXQ3 324 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 PIK3R5Q8WYR1 880 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 IRGQQ8WZA9 623 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 FAF2Q96CS3 445 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 SNF8Q96H20 258 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 PIWIL1Q96J94 861 aaKnown RBP8.76□□□□□ -1.01
RNF4-220ENST00000513578 SLC2A13Q96QE2 648 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 FMO2Q99518 471 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 HINFPQ9BQA5 517 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 LPIN3Q9BQK8 851 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 RTP3Q9BQQ7 232 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 HEMGNQ9BXL5 484 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 DPH5Q9H2P9 285 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 PNPLA8Q9NP80 782 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 TMEM51Q9NW97 253 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 RRN3Q9NYV6 651 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.76□□□□□ -1.01
RNF4-220ENST00000513578 MTRF1LQ9UGC7 380 aaKnown RBP8.76□□□□□ -1.01
RNF4-220ENST00000513578 R3HDM2Q9Y2K5 976 aaKnown RBP8.76□□□□□ -1.01
RNF4-220ENST00000513578 SNX24Q9Y343 169 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 VWA8A3KMH1 1905 aa8.76□□□□□ -1.01
RNF4-220ENST00000513578 SCN5AQ14524 2016 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 PLXNA3P51805 1871 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 CASTOR2A6NHX0 329 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 GOLGA8KD6RF30 607 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 PI4K2BG5E9Z4 385 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 APOC4-APOC2K7ER74 178 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 ENPP3O14638 875 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 ATP2C2O75185 946 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 POMCP01189 267 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 APOC2P02655 101 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 CXCL10P02778 98 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 FAM200BP0CF97 657 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 KRT10P13645 584 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 IGFBP6P24592 240 aaPredicted RBP8.75□□□□□ -1.01
RNF4-220ENST00000513578 NOS2P35228 1153 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 HSD17B3P37058 310 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 GGCXP38435 758 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 MATKP42679 507 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 AIF1P55008 147 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 HDAC4P56524 1084 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 ADCY2Q08462 1091 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 CALCOCO2Q13137 446 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 CBLBQ13191 982 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 BYSLQ13895 437 aaKnown RBP8.75□□□□□ -1.01
RNF4-220ENST00000513578 GPNMBQ14956 572 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 SLC25A52Q3SY17 297 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 MDH1BQ5I0G3 518 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 NOMO2Q5JPE7 1267 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 CLLU1OSQ5K130 101 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 ANKRD33Q7Z3H0 272 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 CROCCP2Q86T23 111 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 FAM35AQ86V20 835 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 RELL1Q8IUW5 271 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 COLGALT2Q8IYK4 626 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 CRIPAKQ8N1N5 446 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 THEM5Q8N1Q8 247 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 ALLCQ8N6M5 410 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 GOLGA6L1Q8N7Z2 621 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 KCTD6Q8NC69 237 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 SP7Q8TDD2 431 aaPredicted RBP8.75□□□□□ -1.01
RNF4-220ENST00000513578 FAM172AQ8WUF8 416 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 ATG4AQ8WYN0 398 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 SEPT8Q92599 483 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 SMARCD1Q96GM5 515 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 PCED1BQ96HM7 432 aa8.75□□□□□ -1.01
RNF4-220ENST00000513578 TOX2Q96NM4 488 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms