RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TRIM66O15016 1216 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 SLC26A4O43511 780 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 ATP2C2O75185 946 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 TULP3O75386 442 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 BDNFP23560 247 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 ANXA13P27216 316 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 GRIK1P39086 918 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 PSMC1P62191 440 aaKnown RBP11.68□□□□□ -0.54
DDX41-216ENST00000513562 C19orf57Q0VDD7 668 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 C10orf76Q5T2E6 689 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 LIMS2Q7Z4I7 341 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 BRSK2Q8IWQ3 736 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 SCUBE3Q8IX30 993 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 RGL4Q8IZJ4 473 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 IPO4Q8TEX9 1081 aaKnown RBP11.68□□□□□ -0.54
DDX41-216ENST00000513562 KBTBD7Q8WVZ9 684 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 POMGNT1Q8WZA1 660 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 FOXJ1Q92949 421 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 OTUB2Q96DC9 234 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 ZFRQ96KR1 1074 aaKnown RBP11.68□□□□□ -0.54
DDX41-216ENST00000513562 DUSP9Q99956 384 aaKnown RBP11.68□□□□□ -0.54
DDX41-216ENST00000513562 SYT15Q9BQS2 421 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 CRTAC1Q9NQ79 661 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 BLOC1S4Q9NUP1 217 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 DEC1Q9P2X7 70 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 SIX4Q9UIU6 781 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 ITGA11Q9UKX5 1188 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 CDH9Q9ULB4 789 aa11.68□□□□□ -0.54
DDX41-216ENST00000513562 SCN1AP35498 2009 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 TK2O00142 265 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 ZBTB24O43167 697 aaPredicted RBP11.67□□□□□ -0.54
DDX41-216ENST00000513562 TBCAO75347 108 aaKnown RBP11.67□□□□□ -0.54
DDX41-216ENST00000513562 C1QL1O75973 258 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 PRB1P04280 392 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 KRT18P05783 430 aaKnown RBP11.67□□□□□ -0.54
DDX41-216ENST00000513562 ZNF883P0CG24 379 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 PLCG1P19174 1290 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 LMO2P25791 158 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 WASP42768 502 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 RBP5P82980 135 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 CYP4F3Q08477 520 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 DHX8Q14562 1220 aaKnown RBP11.67□□□□□ -0.54
DDX41-216ENST00000513562 POSTNQ15063 836 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 MAPRE1Q15691 268 aaKnown RBP11.67□□□□□ -0.54
DDX41-216ENST00000513562 WDR45BQ5MNZ6 344 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 BTBD8Q5XKL5 378 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 EGFLAMQ63HQ2 1017 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 DPH6Q7L8W6 267 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 CSGALNACT2Q8N6G5 542 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 NAT16Q8N8M0 369 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 FAM184AQ8NB25 1140 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 CACTINQ8WUQ7 758 aaKnown RBP11.67□□□□□ -0.54
DDX41-216ENST00000513562 FAM84AQ96KN4 292 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 C8orf48Q96LL4 319 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 GABRG3Q99928 467 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 FAM213AQ9BRX8 229 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 ZHX3Q9H4I2 956 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 CD93Q9NPY3 652 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 LIMCH1Q9UPQ0 1083 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 NFE2L3Q9Y4A8 694 aa11.67□□□□□ -0.54
DDX41-216ENST00000513562 APC2O95996 2303 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 A0A1B0GTW7 788 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 TRABD2BA6NFA1 517 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 F8VP50 259 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 TRIM24O15164 1050 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 NDUFS2O75306 463 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 PPP1R37O75864 691 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 ABL1P00519 1130 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 KRT19P08727 400 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 MBL2P11226 248 aaPredicted RBP11.66□□□□□ -0.54
DDX41-216ENST00000513562 MAOBP27338 520 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 CYP27A1Q02318 531 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 TAF10Q12962 218 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 CAMK2BQ13554 666 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 RILPL1Q5EBL4 403 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 ARL6IP4Q66PJ3 421 aaKnown RBP11.66□□□□□ -0.54
DDX41-216ENST00000513562 NUDT18Q6ZVK8 323 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 MARCH9Q86YJ5 346 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 CHPFQ8IZ52 775 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 ZSWIM2Q8NEG5 633 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 MYCBPAPQ8TBZ2 947 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 SETD7Q8WTS6 366 aaKnown RBP11.66□□□□□ -0.54
DDX41-216ENST00000513562 DNASE2BQ8WZ79 361 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 HVCN1Q96D96 273 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 PCED1BQ96HM7 432 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 MRGPRX1Q96LB2 322 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 AK8Q96MA6 479 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 SLITRK1Q96PX8 696 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 ACOX2Q99424 681 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 MTMR12Q9C0I1 747 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 IL21RQ9HBE5 538 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 SPHK2Q9NRA0 654 aa11.66□□□□□ -0.54
DDX41-216ENST00000513562 RBAKQ9NYW8 714 aaPredicted RBP11.66□□□□□ -0.54
DDX41-216ENST00000513562 COCHO43405 550 aa11.65□□□□□ -0.54
DDX41-216ENST00000513562 CER1O95813 267 aa11.65□□□□□ -0.54
DDX41-216ENST00000513562 ATXN1LP0C7T5 689 aaKnown RBP11.65□□□□□ -0.54
DDX41-216ENST00000513562 ABCG1P45844 678 aa11.65□□□□□ -0.54
DDX41-216ENST00000513562 MCM6Q14566 821 aa11.65□□□□□ -0.54
DDX41-216ENST00000513562 TDRD10Q5VZ19 366 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms