RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-210	ENST00000513153	SMURF2	Q9HAU4	748 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	SCAF8	Q9UPN6	1271 aa	Known RBP	4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	TMEM233	B4DJY2	109 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	CES2	O00748	559 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	DSCR3	O14972	297 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	PHGDH	O43175	533 aa	Known RBP	4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	AKAP10	O43572	662 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	KRT10	P13645	584 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	KRTAP5-9	P26371	169 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	GK	P32189	559 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	BCAT1	P54687	386 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	SUMO2	P61956	95 aa	Known RBP	4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	PSG6	Q00889	435 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	MLC1	Q15049	377 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	ANO6	Q4KMQ2	910 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	C4orf46	Q504U0	113 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	CERCAM	Q5T4B2	595 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	MEX3C	Q5U5Q3	659 aa	Known RBP	4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	IRF2BP2	Q7Z5L9	587 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	NANOGP1	Q8N7R0	232 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	ZNF398	Q8TD17	642 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	PIGO	Q8TEQ8	1089 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	TAAR9	Q96RI9	348 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	ZNF518B	Q9C0D4	1074 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	ASIC5	Q9NY37	505 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	USP22	Q9UPT9	525 aa		4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	DRG1	Q9Y295	367 aa	Known RBP	4.6	□□□□□ -1.67
LINC01088-210	ENST00000513153	ANKRD62	A6NC57	917 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	TMEM232	C9JQI7	657 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	SOCS2	O14508	198 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	MARCH6	O60337	910 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	GCAT	O75600	419 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	RFPL1	O75677	317 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	TUSC2	O75896	110 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	PDGFRB	P09619	1106 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	PHKG2	P15735	406 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	EN2	P19622	333 aa	Predicted RBP	4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	RAB27A	P51159	221 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	ANAPC15	P60006	121 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	HTRA4	P83105	476 aa	Predicted RBP	4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	LRRC41	Q15345	812 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	NPNT	Q6UXI9	565 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	ZBTB34	Q8NCN2	500 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	IL31RA	Q8NI17	732 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	STAG1	Q8WVM7	1258 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	SUCLG2	Q96I99	432 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	PPP1R10	Q96QC0	940 aa	Known RBP	4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	MMS19	Q96T76	1030 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	KRTAP4-4	Q9BYR3	166 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	TRIM5	Q9C035	493 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	A1CF	Q9NQ94	594 aa	Known RBP	4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	DDX56	Q9NY93	547 aa	Known RBP	4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	PAXBP1	Q9Y5B6	917 aa		4.59	□□□□□ -1.67
LINC01088-210	ENST00000513153	LY6G6E	A0A0G2JKS1	128 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153		M0R3H8	397 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	MT-CO3	P00414	261 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	FGB	P02675	491 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	UQCRC1	P31930	480 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	ZNF268	Q14587	947 aa	Predicted RBP	4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	INSC	Q1MX18	579 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	TMEM63B	Q5T3F8	832 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	DCAF12L1	Q5VU92	463 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	ZDHHC24	Q6UX98	284 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	PTCHD4	Q6ZW05	846 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	USP43	Q70EL4	1123 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	MRPL10	Q7Z7H8	261 aa	Known RBP	4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	C16orf52	Q8NHV5	167 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	DNAJB14	Q8TBM8	379 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	VCPIP1	Q96JH7	1222 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	MARK4	Q96L34	752 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	EFHD1	Q9BUP0	239 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	ATP6V0A4	Q9HBG4	840 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	CDY1	Q9Y6F8	540 aa		4.58	□□□□□ -1.68
LINC01088-210	ENST00000513153	hCG_2014768	A0A024R1R8	64 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	CTNND1	O60716	968 aa	Known RBP	4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	EPHA3	P29320	983 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	SLC7A1	P30825	629 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	COPB1	P53618	953 aa	Known RBP	4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	GHRHR	Q02643	423 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	LMAN2	Q12907	356 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	DENND2C	Q68D51	928 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	MAEA	Q7L5Y9	396 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	OVCH2	Q7RTZ1	564 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	COL23A1	Q86Y22	540 aa	Predicted RBP	4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	NSMCE1	Q8WV22	266 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	CUL5	Q93034	780 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	CTHRC1	Q96CG8	243 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	PPP1R9B	Q96SB3	815 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	CDH19	Q9H159	772 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	MGAT4C	Q9UBM8	478 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	LPAR3	Q9UBY5	353 aa		4.57	□□□□□ -1.68
LINC01088-210	ENST00000513153	USP19	O94966	1318 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	CAPN8	A6NHC0	703 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	ADAM10	O14672	748 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	TBX3	O15119	743 aa		4.56	□□□□□ -1.68
LINC01088-210	ENST00000513153	RGS10	O43665	173 aa		4.56	□□□□□ -1.68

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