RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 P2RY2P41231 377 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 CCDC6Q16204 474 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 KNOP1Q1ED39 458 aaKnown RBP13.35□□□□□ -0.27
VEGFA-216ENST00000512683 ANO7Q6IWH7 933 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 LPCAT2Q7L5N7 544 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 TTC16Q8NEE8 873 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 WHAMMQ8TF30 809 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 SCFD1Q8WVM8 642 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 SPACA7Q96KW9 195 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 B3GNT5Q9BYG0 378 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 XYLT2Q9H1B5 865 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 TMEM9BQ9NQ34 198 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 POLR3BQ9NW08 1133 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-216ENST00000512683 CFAP97Q9P2B7 532 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 CFAP45Q9UL16 551 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 STARD13Q9Y3M8 1113 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 KMT2BQ9UMN6 2715 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-216ENST00000512683 ANAPC1Q9H1A4 1944 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 SDK1Q7Z5N4 2213 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 C4orf47A7E2U8 309 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 ZBTB24O43167 697 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-216ENST00000512683 HOXC11O43248 304 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-216ENST00000512683 MAP3K13O43283 966 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 MBL2P11226 248 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-216ENST00000512683 ADH5P11766 374 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 TRIM21P19474 475 aaKnown RBP13.34□□□□□ -0.27
VEGFA-216ENST00000512683 KIR2DL1P43626 348 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-216ENST00000512683 CUL4BQ13620 913 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 CCDC142Q17RM4 750 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 CYP2U1Q7Z449 544 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 SYT12Q8IV01 421 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 SLC9A9Q8IVB4 645 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 GRAMD1CQ8IYS0 662 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 CRYBG2Q8N1P7 616 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 IL17RCQ8NAC3 791 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 CEP76Q8TAP6 659 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 TAF4BQ92750 862 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 FBXO32Q969P5 355 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 BLZF1Q9H2G9 400 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 FBXO44Q9H4M3 255 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 ARHGEF4Q9NR80 690 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 FAM13BQ9NYF5 915 aa13.34□□□□□ -0.27
VEGFA-216ENST00000512683 LNP1A1A4G5 178 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 TBC1D3BA6NDS4 549 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 UPK3BL1B0FP48 263 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 UPK3BL2E5RIL1 263 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 ACTN4O43707 911 aaKnown RBP13.33□□□□□ -0.28
VEGFA-216ENST00000512683 EXOC3O60645 756 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 PROS1P07225 676 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 ZDHHC11BP0C7U3 371 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 KCNA4P22459 653 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 AFMP43652 599 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 NOVA1P51513 510 aaKnown RBP13.33□□□□□ -0.28
VEGFA-216ENST00000512683 CYP2J2P51589 502 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 MYL6P60660 151 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 SGSM1Q2NKQ1 1148 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 ZNF667Q5HYK9 610 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 PSAPL1Q6NUJ1 521 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 SLC36A4Q6YBV0 504 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 RABEPKQ7Z6M1 372 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 UNC93AQ86WB7 457 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 CCDC33Q8N5R6 958 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 TXNDC5Q8NBS9 432 aaKnown RBP13.33□□□□□ -0.28
VEGFA-216ENST00000512683 MDGA1Q8NFP4 955 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 PARD3BQ8TEW8 1205 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 ZNF516Q92618 1163 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 SMARCD1Q96GM5 515 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 NUSAP1Q9BXS6 441 aaKnown RBP13.33□□□□□ -0.28
VEGFA-216ENST00000512683 ZNF518BQ9C0D4 1074 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 DNAI2Q9GZS0 605 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 SMOC1Q9H4F8 434 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 DMAP1Q9NPF5 467 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-216ENST00000512683 DEC1Q9P2X7 70 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 NXF1Q9UBU9 619 aaKnown RBP13.33□□□□□ -0.28
VEGFA-216ENST00000512683 SH3BP1Q9Y3L3 701 aa13.33□□□□□ -0.28
VEGFA-216ENST00000512683 CDX4O14627 284 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-216ENST00000512683 IKBKBO14920 756 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 CLIC2O15247 247 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 COCHO43405 550 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 KLRC4O43908 158 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 KLF8O95600 359 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-216ENST00000512683 C4BPAP04003 597 aaKnown RBP13.32□□□□□ -0.28
VEGFA-216ENST00000512683 MYL1P05976 194 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 SLFN14P0C7P3 912 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 CHRM1P11229 460 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-216ENST00000512683 SLC6A11P48066 632 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 SEC13P55735 322 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 IRX4P78413 519 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 E2F5Q15329 346 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 LY6G5CQ5SRR4 150 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 KLHDC10Q6PID8 442 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 TMEM92Q6UXU6 159 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 HTR3DQ70Z44 454 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 ETFBKMTQ8IXQ9 262 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 ZNF276Q8N554 614 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 ALLCQ8N6M5 410 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 TPSD1Q9BZJ3 242 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 SLC32A1Q9H598 525 aa13.32□□□□□ -0.28
VEGFA-216ENST00000512683 CSNK1G1Q9HCP0 422 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms