RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 HABP4Q5JVS0 413 aaKnown RBP12.42□□□□□ -0.42
PRDM16-207ENST00000512462 CXCL17Q6UXB2 119 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 EXOC3L1Q86VI1 746 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 UNC45BQ8IWX7 931 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 PPIL6Q8IXY8 311 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 SMC1BQ8NDV3 1235 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 FAM161BQ96MY7 647 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 RSAD1Q9HA92 442 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 MYPNQ86TC9 1320 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 IQCA1LA6NCM1 817 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 HAUS5O94927 633 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 IL18RAPO95256 599 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 GRIK1P39086 918 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 SCTRP47872 440 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 GTF2A2P52657 109 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 PPP1R2P3Q6NXS1 205 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 ZNF669Q96BR6 464 aaPredicted RBP12.42□□□□□ -0.42
PRDM16-207ENST00000512462 ZFP42Q96MM3 310 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 PGLYRP2Q96PD5 576 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 GPR20Q99678 358 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 DHX33Q9H6R0 707 aaKnown RBP12.42□□□□□ -0.42
PRDM16-207ENST00000512462 ABI2Q9NYB9 513 aaPredicted RBP12.42□□□□□ -0.42
PRDM16-207ENST00000512462 PHTF1Q9UMS5 762 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 ARL2BPQ9Y2Y0 163 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.42□□□□□ -0.42
PRDM16-207ENST00000512462 A0A1W2PPM1 405 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 ASAP2O43150 1006 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 PMPCBO75439 489 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 AP1G2O75843 785 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 STAMBPO95630 424 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 GHRP10912 638 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 NOVP48745 357 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 SWT1Q5T5J6 900 aaKnown RBP12.42□□□□□ -0.42
PRDM16-207ENST00000512462 SCARA3Q6AZY7 606 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 ZPBP2Q6X784 338 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 MIB1Q86YT6 1006 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 SLC25A41Q8N5S1 370 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 CRYGNQ8WXF5 182 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 PRCCQ92733 491 aaPredicted RBP12.42□□□□□ -0.42
PRDM16-207ENST00000512462 TNIP3Q96KP6 325 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 GAD1Q99259 594 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 TSSK1BQ9BXA7 367 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 WDR35Q9P2L0 1181 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 ANKRD31Q8N7Z5 1873 aa12.42□□□□□ -0.42
PRDM16-207ENST00000512462 CYB561D2O14569 222 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 SPTLC1O15269 473 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 CETPP11597 493 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 GLRBP48167 497 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 OAZ1P54368 228 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 FOXD4Q12950 439 aaPredicted RBP12.41□□□□□ -0.42
PRDM16-207ENST00000512462 KIAA1841Q6NSI8 718 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 SUGP1Q8IWZ8 645 aaKnown RBP12.41□□□□□ -0.42
PRDM16-207ENST00000512462 SLITRK1Q96PX8 696 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 RRAGCQ9HB90 399 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 LRRC4CQ9HCJ2 640 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 WHRNQ9P202 907 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 TUBGCP4Q9UGJ1 667 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 AP4E1Q9UPM8 1137 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 C2CD2LO14523 706 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 VDRP11473 427 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 ETFBP38117 255 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 CASP2P42575 452 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 GAD2Q05329 585 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 TAF11Q15544 211 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 PPP1R26Q5T8A7 1209 aaPredicted RBP12.41□□□□□ -0.42
PRDM16-207ENST00000512462 C1orf127Q8N9H9 656 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 IPMKQ8NFU5 416 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 FSD1LQ9BXM9 530 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 MROH8Q9H579 483 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 GBA2Q9HCG7 927 aaPredicted RBP12.41□□□□□ -0.42
PRDM16-207ENST00000512462 LYPLA2O95372 231 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 CBX6O95503 412 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 HSPA4LO95757 839 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 BGNP21810 368 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 TAP1Q03518 808 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 ARL13BQ3SXY8 428 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 FBXO47Q5MNV8 452 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 C1orf220Q5T0J3 134 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 AP1ARQ63HQ0 302 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 FAM183BPQ6ZVS7 135 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 CRLF3Q8IUI8 442 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 ZNF560Q96MR9 790 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 RAB3IPQ96QF0 476 aaPredicted RBP12.41□□□□□ -0.42
PRDM16-207ENST00000512462 TWNKQ96RR1 684 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 SUDS3Q9H7L9 328 aaPredicted RBP12.41□□□□□ -0.42
PRDM16-207ENST00000512462 ARMCX1Q9P291 453 aa12.41□□□□□ -0.42
PRDM16-207ENST00000512462 A0A1B0GUA9 196 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 EEF2KO00418 725 aaKnown RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 DNALI1O14645 258 aaPredicted RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 TRAPPC3O43617 180 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 MT-CO1P00395 513 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 ATP4AP20648 1035 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 RPA3P35244 121 aaPredicted RBP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 AVPR1AP37288 418 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 ASPHQ12797 758 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 C16orf46Q6P387 395 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 PLEKHH3Q7Z736 793 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 RASSF3Q86WH2 238 aa12.4□□□□□ -0.42
PRDM16-207ENST00000512462 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.4□□□□□ -0.42
PRDM16-207ENST00000512462 TCP10LQ8TDR4 215 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms