RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 FAM186AA6NE01 2351 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 TRIP11Q15643 1979 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 GRIN2DO15399 1336 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 TCRBV7S2A1N4TA0A589 114 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 EPOPA6NHQ4 379 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 AGPSO00116 658 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 GJB6O95452 261 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 SYF2O95926 243 aaKnown RBP13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 FGBP02675 491 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 FAM153BP0C7A2 387 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 RALAP11233 206 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 GPD1P21695 349 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 LILRA4P59901 499 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 SLC25A11Q02978 314 aaKnown RBP13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 BST2Q10589 180 aaKnown RBP13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 ORC1Q13415 861 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 PTK6Q13882 451 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 DSC3Q14574 896 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 FAM153CQ494X1 144 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 TFDP3Q5H9I0 405 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 PPP1R26Q5T8A7 1209 aaPredicted RBP13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 SPOCD1Q6ZMY3 1216 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 ANKRD33Q7Z3H0 272 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 ACOT1Q86TX2 421 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 VSIG1Q86XK7 387 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 TMEM130Q8N3G9 435 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 TSEN2Q8NCE0 465 aaKnown RBP13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 BBOF1Q8ND07 529 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 JOSD2Q8TAC2 188 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 PGBD4Q96DM1 585 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 FMO2Q99518 471 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 HINFPQ9BQA5 517 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 ZDHHC18Q9NUE0 388 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 FAM153AQ9UHL3 310 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 SCN1AP35498 2009 aa13.76□□□□□ -0.21
DEPDC1B-206ENST00000512452 RIF1Q5UIP0 2472 aaKnown RBP13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 BRWD1Q9NSI6 2320 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 PRR23AA6NEV1 266 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 C2CD4BA6NLJ0 364 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 SPTLC1O15269 473 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 PPFIA2O75334 1257 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 LRCH4O75427 683 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 THP07101 528 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 ITIH2P19823 946 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 GGCXP38435 758 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 THPOP40225 353 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 ACLYP53396 1101 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 SLC6A3Q01959 620 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 ITGA7Q13683 1181 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 PPP1R7Q15435 360 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 TRADDQ15628 312 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 TRIM71Q2Q1W2 868 aaKnown RBP13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 FAM102AQ5T9C2 384 aaPredicted RBP13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 OR6B2Q6IFH4 312 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 TMC3Q7Z5M5 1100 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 TTC30AQ86WT1 665 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 SUGP1Q8IWZ8 645 aaKnown RBP13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 ADGRF2Q8IZF7 708 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 TTC13Q8NBP0 860 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 CMASQ8NFW8 434 aaPredicted RBP13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 UBA3Q8TBC4 463 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 WNT8BQ93098 351 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 PBXIP1Q96AQ6 731 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 GDAP1L1Q96MZ0 367 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 HNRNPABQ99729 332 aaKnown RBP13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 TXLNGYQ9BZA5 131 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 DPH5Q9H2P9 285 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 PSD3Q9NYI0 1048 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 GRHL1Q9NZI5 618 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 TBX21Q9UL17 535 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 DRG1Q9Y295 367 aaKnown RBP13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 PLXNA3P51805 1871 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 COL4A6Q14031 1691 aa13.75□□□□□ -0.21
DEPDC1B-206ENST00000512452 hCG_1818297A0A087WSY0 165 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 A0A0U1RQF3 1178 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 ARHGEF37A1IGU5 675 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 GRXCR2A6NFK2 248 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 E5RJQ4 531 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 GABRDO14764 452 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 INPPL1O15357 1258 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 RNF40O75150 1001 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 CDKN2BP42772 138 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 LHX1P48742 406 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 SLC8A3P57103 927 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 KRT17Q04695 432 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 CALCOCO2Q13137 446 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 SLMAPQ14BN4 828 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 TERF2Q15554 542 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 ST3GAL2Q16842 350 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 OLFML1Q6UWY5 402 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 ZDHHC24Q6UX98 284 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 MFSD7Q6UXD7 560 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 CEP128Q6ZU80 1094 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 FAM183BPQ6ZVS7 135 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 CROCCP2Q86T23 111 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 DDX42Q86XP3 938 aaKnown RBP eCLIP13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 CCDC89Q8N998 374 aa13.74□□□□□ -0.21
DEPDC1B-206ENST00000512452 C12orf29Q8N999 325 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms