RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 HAUS4Q9H6D7 363 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 C8orf33Q9H7E9 229 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 NHEJ1Q9H9Q4 299 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 AVENQ9NQS1 362 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 RAB20Q9NX57 234 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 SNTG2Q9NY99 539 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 RBAKQ9NYW8 714 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 NENFQ9UMX5 172 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 INVSQ9Y283 1065 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 FHOD1Q9Y613 1164 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 ANKRD11Q6UB99 2663 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 THADAQ6YHU6 1953 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 BCLAF3A2AJT9 711 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 BTNL10A8MVZ5 291 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 F8VZ95 297 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 INO80B-WBP1J3KQ70 363 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 ARNTLO00327 626 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 PRRG1O14668 218 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 ZNF197O14709 1029 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 KHNYNO15037 678 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 PJA2O43164 708 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 IPO7O95373 1038 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 NPTXRO95502 500 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 CLTAP09496 248 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 MYL4P12829 197 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 ELF1P32519 619 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 CTHP32929 405 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 STAT1P42224 750 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 ARPP19P56211 112 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 ETF1P62495 437 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 TUSC3Q13454 348 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 ELF2Q15723 593 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 IQCEQ6IPM2 695 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 NOTUMQ6P988 496 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 TOGARAM2Q6ZUX3 1019 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 HACE1Q8IYU2 909 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 CHCHD4Q8N4Q1 142 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 ZSWIM2Q8NEG5 633 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 UBE2Q2Q8WVN8 375 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 SHC3Q92529 594 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 RSPRY1Q96DX4 576 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 SAAL1Q96ER3 474 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 ZFYVE19Q96K21 471 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 CCDC42Q96M95 316 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 SPAG5Q96R06 1193 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 FNBP1Q96RU3 617 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 FAM213AQ9BRX8 229 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 TSGA10Q9BZW7 698 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 CDT1Q9H211 546 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 SLITRK6Q9H5Y7 841 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 PLEKHA5Q9HAU0 1116 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 LUC7LQ9NQ29 371 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 GTSE1Q9NYZ3 720 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 PAXBP1Q9Y5B6 917 aa11.15□□□□□ -0.62
PDLIM5-217ENST00000512274 SETXQ7Z333 2677 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 MYBPHLA2RUH7 354 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 GOLGA8IPA6NC78 632 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 GOLGA8JA6NMD2 632 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 USP27XA6NNY8 438 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 I3L4J1 428 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 RHOBTB1O94844 696 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 STAU1O95793 577 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 ARF4P18085 180 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 GBP1P32455 592 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 SOX5P35711 763 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 GCLMP48507 274 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 VAV2P52735 878 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 IRX4P78413 519 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 SIM1P81133 766 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 NCBP1Q09161 790 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 SCAPQ12770 1279 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 SLC18A3Q16572 532 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 ZNF568Q3ZCX4 644 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 CYP4A22Q5TCH4 519 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 RDH13Q8NBN7 331 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 TAF4BQ92750 862 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 ZBTB45Q96K62 511 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 NT5C1BQ96P26 610 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 HHIPQ96QV1 700 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 GPR88Q9GZN0 384 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 CXCL16Q9H2A7 254 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 PDZD7Q9H5P4 517 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 VRTNQ9H8Y1 702 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 MTRRQ9UBK8 725 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 DNAJC12Q9UKB3 198 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 INTUQ9ULD6 942 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 CNTN6Q9UQ52 1028 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 DERAQ9Y315 318 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 REXO2Q9Y3B8 237 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 C2CD2Q9Y426 696 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 SHROOM3Q8TF72 1996 aa11.14□□□□□ -0.63
PDLIM5-217ENST00000512274 CHADO15335 359 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 MOSPD3O75425 235 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 CAPNS1P04632 268 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 TBXAS1P24557 533 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 TKTP29401 623 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 GRM5P41594 1212 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 ARHGAP25P42331 645 aa11.13□□□□□ -0.63
PDLIM5-217ENST00000512274 KIF11P52732 1056 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms