RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 SPOPLQ6IQ16 392 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 CD300LGQ6UXG3 332 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 BEND4Q6ZU67 534 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 GAS2L3Q86XJ1 694 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 VPS52Q8N1B4 723 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 C12orf50Q8NA57 414 aaPredicted RBP10.07□□□□□ -0.8
SNF8-211ENST00000512243 APPL2Q8NEU8 664 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 POF1BQ8WVV4 589 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 SEMA4DQ92854 862 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 NT5C1BQ96P26 610 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 MMS19Q96T76 1030 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 CRACR2AQ9BSW2 395 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 PI4K2AQ9BTU6 479 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 TTPALQ9BTX7 342 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 LSM14BQ9BX40 385 aaKnown RBP10.07□□□□□ -0.8
SNF8-211ENST00000512243 TMPRSS13Q9BYE2 586 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 GPR62Q9BZJ7 368 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 LMAN2LQ9H0V9 348 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 ZBP1Q9H171 429 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 XYLT2Q9H1B5 865 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 ENTPD7Q9NQZ7 604 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 TLR9Q9NR96 1032 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 GDAP2Q9NXN4 497 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 DSEQ9UL01 958 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 SNX9Q9Y5X1 595 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 MTCL1Q9Y4B5 1905 aaKnown RBP10.07□□□□□ -0.8
SNF8-211ENST00000512243 PLXNA3P51805 1871 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 PRRC2BQ5JSZ5 2229 aaKnown RBP10.06□□□□□ -0.8
SNF8-211ENST00000512243 PTPRDP23468 1912 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 MEGF11A6BM72 1044 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 EPOPA6NHQ4 379 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 LRRC10BA6NIK2 292 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 M0QZQ0 153 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 GSC2O15499 205 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 CBFA2T2O43439 604 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 LPXNO60711 386 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 CSPG5O95196 566 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 TGFB1P01137 390 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 TYMPP19971 482 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 IGFBP6P24592 240 aaPredicted RBP10.06□□□□□ -0.8
SNF8-211ENST00000512243 TKTP29401 623 aaKnown RBP10.06□□□□□ -0.8
SNF8-211ENST00000512243 GLUD2P49448 558 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 UBASH3AP57075 661 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 WDR72Q3MJ13 1102 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 HABP4Q5JVS0 413 aaKnown RBP10.06□□□□□ -0.8
SNF8-211ENST00000512243 PLPP4Q5VZY2 271 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 SCARA3Q6AZY7 606 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 KIAA1841Q6NSI8 718 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 PDXDC1Q6P996 788 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 APTXQ7Z2E3 356 aaKnown RBP10.06□□□□□ -0.8
SNF8-211ENST00000512243 METTL23Q86XA0 190 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 CEP57Q86XR8 500 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 RNF168Q8IYW5 571 aaPredicted RBP10.06□□□□□ -0.8
SNF8-211ENST00000512243 ADGRF2Q8IZF7 708 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 TMEM86AQ8N2M4 240 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 TOP6BLQ8N6T0 577 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 SPATA18Q8TC71 538 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 SPPL3Q8TCT6 385 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 CITED4Q96RK1 184 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 VN1R3Q9BXE9 311 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 SMYD3Q9H7B4 428 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 APOBEC3GQ9HC16 384 aaKnown RBP10.06□□□□□ -0.8
SNF8-211ENST00000512243 ALG13Q9NP73 1137 aaKnown RBP10.06□□□□□ -0.8
SNF8-211ENST00000512243 IFNKQ9P0W0 207 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 SSX2IPQ9Y2D8 614 aa10.06□□□□□ -0.8
SNF8-211ENST00000512243 CDH23Q9H251 3354 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 SOWAHDA6NJG2 315 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 H7C4K7 107 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 EIF1AYO14602 144 aaKnown RBP10.05□□□□□ -0.8
SNF8-211ENST00000512243 GRM6O15303 877 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 CYP11A1P05108 521 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 CTSAP10619 480 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 DRD2P14416 443 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 TBXAS1P24557 533 aaPredicted RBP10.05□□□□□ -0.8
SNF8-211ENST00000512243 PON1P27169 355 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 YWHAEP62258 255 aaKnown RBP10.05□□□□□ -0.8
SNF8-211ENST00000512243 DSG1Q02413 1049 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 CREMQ03060 361 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 YWHAHQ04917 246 aaPredicted RBP10.05□□□□□ -0.8
SNF8-211ENST00000512243 LRMPQ12912 555 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 SMC1AQ14683 1233 aaKnown RBP10.05□□□□□ -0.8
SNF8-211ENST00000512243 SYCP1Q15431 976 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 PSMD5Q16401 504 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 PTPROQ16827 1216 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 SGO2Q562F6 1265 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 KIAA0319Q5VV43 1072 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 WSCD1Q658N2 575 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 OVOS1Q6IE37 1185 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 ZNF280DQ6N043 979 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 TRIM65Q6PJ69 517 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 ANKS3Q6ZW76 656 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 TMC7Q7Z402 723 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 PPM1KQ8N3J5 372 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 PDCL2Q8N4E4 241 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 RIN2Q8WYP3 895 aaPredicted RBP10.05□□□□□ -0.8
SNF8-211ENST00000512243 ELMO3Q96BJ8 720 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 FAXDC2Q96IV6 333 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 FAM81BQ96LP2 452 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 TCF25Q9BQ70 676 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 NRSN2Q9GZP1 204 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms