RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 FAM92AA1XBS5 289 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 COCHO43405 550 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 LAMTOR5O43504 91 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 TRIM21P19474 475 aaKnown RBP17.43■□□□□ 0.38
DDX41-213ENST00000512027 ACO1P21399 889 aaKnown RBP17.43■□□□□ 0.38
DDX41-213ENST00000512027 NBL1P41271 181 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 RPS9P46781 194 aaKnown RBP17.43■□□□□ 0.38
DDX41-213ENST00000512027 PPP3CCP48454 512 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 IFNAR2P48551 515 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 SLC7A9P82251 487 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 EML3Q32P44 896 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 FOXR2Q6PJQ5 311 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 UBR7Q8N806 425 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 PDZD8Q8NEN9 1154 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 CHRDQ9H2X0 955 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 MYOFQ9NZM1 2061 aa17.43■□□□□ 0.38
DDX41-213ENST00000512027 KIAA1549LQ6ZVL6 1849 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 CALCAP01258 141 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 ZDHHC11BP0C7U3 371 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 MLLT6P55198 1093 aaPredicted RBP17.42■□□□□ 0.38
DDX41-213ENST00000512027 CSTF1Q05048 431 aaKnown RBP17.42■□□□□ 0.38
DDX41-213ENST00000512027 KCNH2Q12809 1159 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 PDGFRLQ15198 375 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 ARHGEF19Q8IW93 802 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 LMO3Q8TAP4 145 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 OVCA2Q8WZ82 227 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 WBP2Q969T9 261 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 MSANTD3Q96H12 275 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 ZFRQ96KR1 1074 aaKnown RBP17.42■□□□□ 0.38
DDX41-213ENST00000512027 DUSP16Q9BY84 665 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 NUP62CLQ9H1M0 184 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 ECT2Q9H8V3 914 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 FBRSL1Q9HCM7 1045 aaKnown RBP17.42■□□□□ 0.38
DDX41-213ENST00000512027 C2orf42Q9NWW7 574 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 OSER1Q9NX31 292 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 CFAP97Q9P2B7 532 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 RWDD2AQ9UIY3 292 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 FRYLO94915 3013 aa17.42■□□□□ 0.38
DDX41-213ENST00000512027 TULP2O00295 520 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 TBX18O95935 607 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 IRF1P10914 325 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 TCF3P15923 654 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 HOXC13P31276 330 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 GJA4P35212 333 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 MAGEA9P43362 315 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 PDE6CP51160 858 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 GOLGA7BQ2TAP0 167 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 DPCR1Q3MIW9 517 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 HECTD3Q5T447 861 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 CLEC17AQ6ZS10 378 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 RRAGAQ7L523 313 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 ASCL5Q7RTU5 278 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 TTC30AQ86WT1 665 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 CREBRFQ8IUR6 639 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 PPM1KQ8N3J5 372 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 FAXDC2Q96IV6 333 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 CNOT6LQ96LI5 555 aaKnown RBP17.41■□□□□ 0.38
DDX41-213ENST00000512027 NT5C1BQ96P26 610 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 NMUR1Q9HB89 426 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 NUDT5Q9UKK9 219 aa17.41■□□□□ 0.38
DDX41-213ENST00000512027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.41■□□□□ 0.38
DDX41-213ENST00000512027 A0A1W2PQH9 124 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 MDM4O15151 490 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 AFPP02771 609 aaKnown RBP17.4■□□□□ 0.38
DDX41-213ENST00000512027 CD19P15391 556 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 PFKLP17858 780 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 MARSP56192 900 aaKnown RBP17.4■□□□□ 0.38
DDX41-213ENST00000512027 SATB1Q01826 763 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 CCINQ13939 588 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 SNX30Q5VWJ9 437 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 ARHGAP17Q68EM7 881 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 FSTL4Q6MZW2 842 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 PKN3Q6P5Z2 889 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 IRF2BP1Q8IU81 584 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 CPA6Q8N4T0 437 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 TTC39CQ8N584 583 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 ATP2A3Q93084 1043 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 FBXO44Q9H4M3 255 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 COMMD8Q9NX08 183 aa17.4■□□□□ 0.38
DDX41-213ENST00000512027 PROB1E7EW31 1015 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 RNF225M0QZC1 329 aaPredicted RBP17.39■□□□□ 0.37
DDX41-213ENST00000512027 PMM2O15305 246 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 TLR5O60602 858 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 GFRA3O60609 400 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 GNA14O95837 355 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 EGFP01133 1207 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 CCDC192P0DO97 292 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 KIF11P52732 1056 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 LRRC32Q14392 662 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 TMEM270Q6UE05 265 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 SCD5Q86SK9 330 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 EHBP1Q8NDI1 1231 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 GPT2Q8TD30 523 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 INTS2Q9H0H0 1204 aaKnown RBP17.39■□□□□ 0.37
DDX41-213ENST00000512027 PRMT8Q9NR22 394 aaPredicted RBP17.39■□□□□ 0.37
DDX41-213ENST00000512027 TLR8Q9NR97 1041 aaKnown RBP17.39■□□□□ 0.37
DDX41-213ENST00000512027 TSPAN16Q9UKR8 245 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 SCML2Q9UQR0 700 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 PCDHB4Q9Y5E5 795 aa17.39■□□□□ 0.37
DDX41-213ENST00000512027 PRR23AA6NEV1 266 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms