RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 TOP6BLQ8N6T0 577 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 TRIML1Q8N9V2 468 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 ACOX2Q99424 681 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 MTMR12Q9C0I1 747 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 SLC6A17Q9H1V8 727 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 MAGEC2Q9UBF1 373 aaPredicted RBP20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 CYP8B1Q9UNU6 501 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 PTPRJQ12913 1337 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 GOLGA8IPA6NC78 632 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 GOLGA8JA6NMD2 632 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 CBFA2T3O75081 653 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 TBCAO75347 108 aaKnown RBP20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 ADH1CP00326 375 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 KRT18P05783 430 aaKnown RBP20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 NDUFV2P19404 249 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 GRIK1P39086 918 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 PDE6CP51160 858 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 HNRNPDQ14103 355 aaKnown RBP20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 SLC36A4Q6YBV0 504 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 ZNF513Q8N8E2 541 aaPredicted RBP20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 KIAA1958Q8N8K9 716 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 LRIG1Q96JA1 1093 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 PDE11AQ9HCR9 933 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 TENM4Q6N022 2769 aa20.3■□□□□ 0.84
HMGCS1-206ENST00000511774 A0A1W2PQD8 194 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 TBC1D3BA6NDS4 549 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 F8VP50 259 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 SLC9A3R1O14745 358 aaPredicted RBP20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 TULP3O75386 442 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 ABL1P00519 1130 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 KRT19P08727 400 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 PDGFRBP09619 1106 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 TAF10Q12962 218 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 RILPL1Q5EBL4 403 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 EGFLAMQ63HQ2 1017 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 ARL6IP4Q66PJ3 421 aaKnown RBP20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 VSTM1Q6UX27 236 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 C4orf50Q6ZRC1 276 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 PCED1BQ96HM7 432 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 ITGA11Q9UKX5 1188 aa20.29■□□□□ 0.84
HMGCS1-206ENST00000511774 HOXB2P14652 356 aa20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 MAOBP27338 520 aa20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 CYP27A1Q02318 531 aa20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 SLC14A1Q13336 389 aa20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 PLEKHG6Q3KR16 790 aa20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 MCTP1Q6DN14 999 aa20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 ADAM32Q8TC27 787 aa20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 FGFBP2Q9BYJ0 223 aa20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 TRIM9Q9C026 710 aa20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 RBAKQ9NYW8 714 aaPredicted RBP20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 CDH9Q9ULB4 789 aa20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 SHROOM3Q8TF72 1996 aa20.28■□□□□ 0.84
HMGCS1-206ENST00000511774 SYPP08247 313 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 MBL2P11226 248 aaPredicted RBP20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 CASP5P51878 434 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 NOP14P78316 857 aaKnown RBP20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 RBP5P82980 135 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 GRIK2Q13002 908 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 POSTNQ15063 836 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 C10orf76Q5T2E6 689 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 TOGARAM2Q6ZUX3 1019 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 RABEPKQ7Z6M1 372 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 TMEM25Q86YD3 366 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 TERB1Q8NA31 727 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 OR5B17Q8NGF7 314 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 CALML4Q96GE6 196 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 ZNF419Q96HQ0 510 aaPredicted RBP20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 CBWD1Q9BRT8 395 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 IL21RQ9HBE5 538 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 TOR4AQ9NXH8 423 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 TBC1D7Q9P0N9 293 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 PCOLCE2Q9UKZ9 415 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 PCDHB9Q9Y5E1 797 aa20.27■□□□□ 0.84
HMGCS1-206ENST00000511774 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 HOXC11O43248 304 aaPredicted RBP20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 COCHO43405 550 aa20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 SLC26A4O43511 780 aa20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 NTSR1P30989 418 aa20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 DDIT3P35638 169 aa20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 UBA7P41226 1012 aa20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 MDH1BQ5I0G3 518 aa20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 DYMQ7RTS9 669 aa20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 BBS7Q8IWZ6 715 aa20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 IPO4Q8TEX9 1081 aaKnown RBP20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 CACTINQ8WUQ7 758 aaKnown RBP20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 LARP4BQ92615 738 aaKnown RBP20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 AK8Q96MA6 479 aa20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 RAD54BQ9Y620 910 aa20.26■□□□□ 0.83
HMGCS1-206ENST00000511774 E2F8A0AVK6 867 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 PRB1P04280 392 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 WARSP23381 471 aaKnown RBP20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 ANXA13P27216 316 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 ABCD1P33897 745 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 BNC1Q01954 994 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 GAD2Q05329 585 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 IFRD2Q12894 506 aaPredicted RBP20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 GLRX5Q86SX6 157 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 RGL4Q8IZJ4 473 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 MYCBPAPQ8TBZ2 947 aa20.25■□□□□ 0.83
HMGCS1-206ENST00000511774 KCNV2Q8TDN2 545 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms