RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 KCNH2Q12809 1159 aa12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 ARHGAP17Q68EM7 881 aa12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 ALYREFQ86V81 257 aaKnown RBP12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 MLKLQ8NB16 471 aa12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 DNAI2Q9GZS0 605 aa12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 LINC00597Q9H2U6 94 aa12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 FBXO44Q9H4M3 255 aa12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 SPATA6Q9NWH7 488 aaPredicted RBP12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 DUS2Q9NX74 493 aaKnown RBP12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 CPQQ9Y646 472 aa12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 WNT6Q9Y6F9 365 aa12.28□□□□□ -0.44
SH3RF1-205ENST00000511421 COCHO43405 550 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 FGFR1OPO95684 399 aaKnown RBP12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 CCDC192P0DO97 292 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 TBXAS1P24557 533 aaPredicted RBP12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 TUBP50607 506 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 KIF11P52732 1056 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 MTAPQ13126 283 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 GAS6Q14393 721 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 PON2Q15165 354 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 EML3Q32P44 896 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 HECTD3Q5T447 861 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 MAMSTRQ6ZN01 415 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 IRF2BP1Q8IU81 584 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 KIAA1958Q8N8K9 716 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 EHBP1Q8NDI1 1231 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 TTC16Q8NEE8 873 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 KAT5Q92993 513 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 JAKMIP2Q96AA8 810 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 ZFRQ96KR1 1074 aaKnown RBP12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 NT5C1BQ96P26 610 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 NUP62CLQ9H1M0 184 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 CCSER2Q9H7U1 834 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 ECT2Q9H8V3 914 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 SCML2Q9UQR0 700 aa12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.27□□□□□ -0.45
SH3RF1-205ENST00000511421 AFPP02771 609 aaKnown RBP12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 SP9P0CG40 484 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 MBL2P11226 248 aaPredicted RBP12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 ACO1P21399 889 aaKnown RBP12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 IFNAR2P48551 515 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 YWHAEP62258 255 aaKnown RBP12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 CCINQ13939 588 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 TTC30AQ86WT1 665 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 ANKRD52Q8NB46 1076 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 IPO9Q96P70 1041 aaKnown RBP12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 RBM12Q9NTZ6 932 aaKnown RBP12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 OSER1Q9NX31 292 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 SMPD4Q9NXE4 827 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 FBXO4Q9UKT5 387 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 USP3Q9Y6I4 520 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 MYH10P35580 1976 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 TRDMT1O14717 391 aaKnown RBP12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 CYP26A1O43174 497 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 LAMTOR5O43504 91 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 GJA4P35212 333 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 CETN1Q12798 172 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 DPCR1Q3MIW9 517 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 TMEM196Q5HYL7 178 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 DGKKQ5KSL6 1271 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 ARHGEF19Q8IW93 802 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 PPM1KQ8N3J5 372 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 CPA6Q8N4T0 437 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 GPT2Q8TD30 523 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 ATP2A3Q93084 1043 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 CNOT6LQ96LI5 555 aaKnown RBP12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 IER2Q9BTL4 223 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 UBXN6Q9BZV1 441 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 NMUR1Q9HB89 426 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 PRMT8Q9NR22 394 aaPredicted RBP12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 TLR8Q9NR97 1041 aaKnown RBP12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 CFAP97Q9P2B7 532 aa12.26□□□□□ -0.45
SH3RF1-205ENST00000511421 ZFHX2Q9C0A1 2572 aaPredicted RBP12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 MYO15AQ9UKN7 3530 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 DMDP11532 3685 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 RNF225M0QZC1 329 aaPredicted RBP12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 TLR5O60602 858 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 TBX18O95935 607 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 GCNT1Q02742 428 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 LRRC32Q14392 662 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 SGO2Q562F6 1265 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 RAB41Q5JT25 222 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 NAIF1Q69YI7 327 aaPredicted RBP12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 FSTL4Q6MZW2 842 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 RRAGAQ7L523 313 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 CCDC186Q7Z3E2 898 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 SCD5Q86SK9 330 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 PIGZQ86VD9 579 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 KREMEN1Q96MU8 473 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 GBP4Q96PP9 640 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 INTS2Q9H0H0 1204 aaKnown RBP12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 FBRSL1Q9HCM7 1045 aaKnown RBP12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 CYLDQ9NQC7 956 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 TSPAN16Q9UKR8 245 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 PATJQ8NI35 1801 aa12.25□□□□□ -0.45
SH3RF1-205ENST00000511421 RIF1Q5UIP0 2472 aaKnown RBP12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 HELZP42694 1942 aaKnown RBP12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 A0A1W2PQH9 124 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 E2F8A0AVK6 867 aa12.24□□□□□ -0.45
SH3RF1-205ENST00000511421 TULP2O00295 520 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms