RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 TMEM127O75204 238 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 FRAT2O75474 233 aaPredicted RBP6.5□□□□□ -1.37
GYPB-212ENST00000511198 BAIAP3O94812 1187 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 IQCF3P0C7M6 154 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 SP9P0CG40 484 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 MAKP20794 623 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 WNT3AP56704 352 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 BEX3Q00994 111 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 COASYQ13057 564 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 ITGA7Q13683 1181 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 GPNMBQ14956 572 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 CT83Q5H943 113 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 DCAF17Q5H9S7 520 aaPredicted RBP6.5□□□□□ -1.37
GYPB-212ENST00000511198 RABL3Q5HYI8 236 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 GLB1L2Q8IW92 636 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 UBALD2Q8IYN6 164 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 UBR7Q8N806 425 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 CLRN3Q8NCR9 226 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 NEU4Q8WWR8 484 aaPredicted RBP6.5□□□□□ -1.37
GYPB-212ENST00000511198 CLIP3Q96DZ5 547 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 MFSD1Q9H3U5 465 aa6.5□□□□□ -1.37
GYPB-212ENST00000511198 FREM2Q5SZK8 3169 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 SPTA1P02549 2419 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 RELNP78509 3460 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 FAM20BO75063 409 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 SNAI1O95863 264 aaPredicted RBP6.49□□□□□ -1.37
GYPB-212ENST00000511198 LPLP06858 475 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 PGK2P07205 417 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 LTA4HP09960 611 aaKnown RBP6.49□□□□□ -1.37
GYPB-212ENST00000511198 NCLP19338 710 aaKnown RBP6.49□□□□□ -1.37
GYPB-212ENST00000511198 HK1P19367 917 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 HSD3B2P26439 372 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 RFC2P35250 354 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 PSMC6P62333 389 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 DUSP2Q05923 314 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 DPTQ07507 201 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 UBE4AQ14139 1066 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 ZNF627Q7L945 461 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 UBE3BQ7Z3V4 1068 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 IL17RAQ96F46 866 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 TTC1Q99614 292 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 CPPED1Q9BRF8 314 aaPredicted RBP6.49□□□□□ -1.37
GYPB-212ENST00000511198 PDCD2LQ9BRP1 358 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 LSM14BQ9BX40 385 aaKnown RBP6.49□□□□□ -1.37
GYPB-212ENST00000511198 CPEB1Q9BZB8 566 aaKnown RBP6.49□□□□□ -1.37
GYPB-212ENST00000511198 KCTD10Q9H3F6 313 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 SLITRK6Q9H5Y7 841 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 TRMT13Q9NUP7 481 aaKnown RBP6.49□□□□□ -1.37
GYPB-212ENST00000511198 SLC5A4Q9NY91 659 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 SORCS3Q9UPU3 1222 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 CDY2AQ9Y6F7 541 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 SALL1Q9NSC2 1324 aa6.49□□□□□ -1.37
GYPB-212ENST00000511198 ANP32CO43423 234 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 DNAJC6O75061 913 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 ADH4P08319 380 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 NDUFV1P49821 464 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 GZMKP49863 264 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 PTTG1IPP53801 180 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 LGALS4P56470 323 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 SESN3P58005 492 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 SRSF1Q07955 248 aaKnown RBP eCLIP6.48□□□□□ -1.37
GYPB-212ENST00000511198 STRN3Q13033 797 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 PICALMQ13492 652 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 C19orf54Q5BKX5 351 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 METTL24Q5JXM2 366 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 CC2D1BQ5T0F9 858 aaKnown RBP6.48□□□□□ -1.37
GYPB-212ENST00000511198 ABHD15Q6UXT9 468 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 Q6ZPA2 131 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 LDLRAD3Q86YD5 345 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 ABRAQ8N0Z2 381 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 LILRA3Q8N6C8 439 aaPredicted RBP6.48□□□□□ -1.37
GYPB-212ENST00000511198 OR52N2Q8NGI0 321 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 SUSD6Q92537 303 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 EAF2Q96CJ1 260 aaPredicted RBP6.48□□□□□ -1.37
GYPB-212ENST00000511198 CHFRQ96EP1 664 aa6.48□□□□□ -1.37
GYPB-212ENST00000511198 ALDH8A1Q9H2A2 487 aaPredicted RBP6.48□□□□□ -1.37
GYPB-212ENST00000511198 REXO2Q9Y3B8 237 aaKnown RBP6.48□□□□□ -1.37
GYPB-212ENST00000511198 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.48□□□□□ -1.37
GYPB-212ENST00000511198 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.47□□□□□ -1.37
GYPB-212ENST00000511198 GRM6O15303 877 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 ULK1O75385 1050 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 ATF7P17544 494 aaPredicted RBP6.47□□□□□ -1.37
GYPB-212ENST00000511198 NR4A1P22736 598 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 PRDX5P30044 214 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 MEF2AQ02078 507 aaPredicted RBP6.47□□□□□ -1.37
GYPB-212ENST00000511198 GCKRQ14397 625 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 CCDC6Q16204 474 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 FSCN1Q16658 493 aaKnown RBP6.47□□□□□ -1.37
GYPB-212ENST00000511198 TAF7LQ5H9L4 462 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 SDE2Q6IQ49 451 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 C19orf48Q6RUI8 117 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 DOK3Q7L591 496 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 SNX33Q8WV41 574 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 MENTQ9BUN1 341 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 SPATC1LQ9H0A9 340 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 IKZF4Q9H2S9 585 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 CAAP1Q9H8G2 361 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.47□□□□□ -1.37
GYPB-212ENST00000511198 ASTN1O14525 1302 aa6.47□□□□□ -1.37
GYPB-212ENST00000511198 TMEM8BA6NDV4 472 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms