RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 GRAMD1AQ96CP6 724 aa6.51□□□□□ -1.37
CHD1-206ENST00000511067 RSPRY1Q96DX4 576 aa6.51□□□□□ -1.37
CHD1-206ENST00000511067 HIST1H2AAQ96QV6 131 aa6.51□□□□□ -1.37
CHD1-206ENST00000511067 NUDT22Q9BRQ3 303 aa6.51□□□□□ -1.37
CHD1-206ENST00000511067 SORBS1Q9BX66 1292 aaKnown RBP6.51□□□□□ -1.37
CHD1-206ENST00000511067 VN1R3Q9BXE9 311 aa6.51□□□□□ -1.37
CHD1-206ENST00000511067 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
CHD1-206ENST00000511067 GTF2A1LQ9UNN4 478 aa6.51□□□□□ -1.37
CHD1-206ENST00000511067 COL15A1P39059 1388 aa6.51□□□□□ -1.37
CHD1-206ENST00000511067 ADM5C9JUS6 153 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 SLC16A3O15427 465 aaKnown RBP6.5□□□□□ -1.37
CHD1-206ENST00000511067 GATMP50440 423 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 BLOC1S1P78537 153 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 NRN1LQ496H8 165 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 DEPDC1Q5TB30 811 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 VWA1Q6PCB0 445 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 NRSN1Q8IZ57 195 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 OTUD7AQ8TE49 926 aaPredicted RBP6.5□□□□□ -1.37
CHD1-206ENST00000511067 LPIN2Q92539 896 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 PTCD3Q96EY7 689 aaKnown RBP6.5□□□□□ -1.37
CHD1-206ENST00000511067 WDR24Q96S15 920 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 C17orf80Q9BSJ5 609 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 ALG8Q9BVK2 526 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 PGAP2Q9UHJ9 254 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 USP22Q9UPT9 525 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 SH2B3Q9UQQ2 575 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 HS3ST4Q9Y661 456 aa6.5□□□□□ -1.37
CHD1-206ENST00000511067 CENPVL1A0A0U1RR11 272 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 UNC119BA6NIH7 251 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 M0R3H8 397 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 IPO5O00410 1097 aaKnown RBP6.49□□□□□ -1.37
CHD1-206ENST00000511067 PPM1DO15297 605 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 SRGAP2BP0DMP2 458 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 PAX3P23760 479 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 TIRAPP58753 221 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 TP53BP2Q13625 1128 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 SF3B3Q15393 1217 aaKnown RBP6.49□□□□□ -1.37
CHD1-206ENST00000511067 SPATS1Q496A3 300 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 ZNF618Q5T7W0 954 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 ABHD17BQ5VST6 288 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 JMJD6Q6NYC1 403 aaPredicted RBP6.49□□□□□ -1.37
CHD1-206ENST00000511067 KLHL17Q6TDP4 642 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 GPR149Q86SP6 731 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 TTC30AQ86WT1 665 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 SOCS4Q8WXH5 440 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 HAS1Q92839 578 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 EVI5LQ96CN4 794 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 PGBD1Q96JS3 809 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 PLEKHG4BQ96PX9 1271 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 GLOD4Q9HC38 313 aa6.49□□□□□ -1.37
CHD1-206ENST00000511067 SCAF8Q9UPN6 1271 aaKnown RBP6.49□□□□□ -1.37
CHD1-206ENST00000511067 ZAR1LA6NP61 321 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 DHHO43323 396 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 ACTL6BO94805 426 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 ANXA6P08133 673 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 C1SP09871 688 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 EGR2P11161 476 aaPredicted RBP6.48□□□□□ -1.37
CHD1-206ENST00000511067 CD19P15391 556 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 HNRNPMP52272 730 aaKnown RBP eCLIP6.48□□□□□ -1.37
CHD1-206ENST00000511067 ALFQ53S48 1182 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 DBX2Q6ZNG2 339 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 RAB11FIP4Q86YS3 637 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 SUN3Q8TAQ9 357 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 MYCBPAPQ8TBZ2 947 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 FKBP10Q96AY3 582 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 ZBTB45Q96K62 511 aaPredicted RBP6.48□□□□□ -1.37
CHD1-206ENST00000511067 RTKNQ9BST9 563 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 SAYSD1Q9NPB0 183 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 KCTD5Q9NXV2 234 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 RIMKLBQ9ULI2 386 aa6.48□□□□□ -1.37
CHD1-206ENST00000511067 DRG1Q9Y295 367 aaKnown RBP6.48□□□□□ -1.37
CHD1-206ENST00000511067 PIPSLA2A3N6 862 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 AGPSO00116 658 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 FCHO1O14526 889 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 ZSCAN9O15535 394 aaPredicted RBP6.47□□□□□ -1.37
CHD1-206ENST00000511067 USP1O94782 785 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 NXPH3O95157 252 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 ONECUT2O95948 504 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 CST5P28325 142 aaPredicted RBP6.47□□□□□ -1.37
CHD1-206ENST00000511067 HTR7P34969 479 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 ZEB1P37275 1124 aaPredicted RBP6.47□□□□□ -1.37
CHD1-206ENST00000511067 PTPRRQ15256 657 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 NBPF8Q3BBV2 869 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 TRIM60Q495X7 471 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 ATPAF1Q5TC12 328 aaPredicted RBP6.47□□□□□ -1.37
CHD1-206ENST00000511067 SLC9A4Q6AI14 798 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 SULT6B1Q6IMI4 303 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 SLC44A2Q8IWA5 706 aaPredicted RBP6.47□□□□□ -1.37
CHD1-206ENST00000511067 SPPL3Q8TCT6 385 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 WDR60Q8WVS4 1066 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 ASB10Q8WXI3 467 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 GLG1Q92896 1179 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 DDX23Q9BUQ8 820 aaKnown RBP6.47□□□□□ -1.37
CHD1-206ENST00000511067 PABPC3Q9H361 631 aaKnown RBP6.47□□□□□ -1.37
CHD1-206ENST00000511067 NRDE2Q9H7Z3 1164 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 CASS4Q9NQ75 786 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 PRDM8Q9NQV8 689 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 KLC4Q9NSK0 619 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 SAGE1Q9NXZ1 904 aa6.47□□□□□ -1.37
CHD1-206ENST00000511067 TESQ9UGI8 421 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms