RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 AMPD2Q01433 879 aa22.48■■□□□ 1.19
LIN54-208ENST00000509748 GRSF1Q12849 480 aaKnown RBP eCLIP22.48■■□□□ 1.19
LIN54-208ENST00000509748 PPP2R5DQ14738 602 aa22.48■■□□□ 1.19
LIN54-208ENST00000509748 PDZD8Q8NEN9 1154 aa22.48■■□□□ 1.19
LIN54-208ENST00000509748 SMARCE1Q969G3 411 aa22.48■■□□□ 1.19
LIN54-208ENST00000509748 ZFRQ96KR1 1074 aaKnown RBP22.48■■□□□ 1.19
LIN54-208ENST00000509748 P2RY13Q9BPV8 354 aa22.48■■□□□ 1.19
LIN54-208ENST00000509748 IMPG2Q9BZV3 1241 aa22.48■■□□□ 1.19
LIN54-208ENST00000509748 SMPD4Q9NXE4 827 aa22.48■■□□□ 1.19
LIN54-208ENST00000509748 DCHS1Q96JQ0 3298 aa22.47■■□□□ 1.19
LIN54-208ENST00000509748 HHLA1C9JL84 531 aa22.47■■□□□ 1.19
LIN54-208ENST00000509748 COCHO43405 550 aa22.47■■□□□ 1.19
LIN54-208ENST00000509748 EPB41P11171 864 aaKnown RBP22.47■■□□□ 1.19
LIN54-208ENST00000509748 HOXA6P31267 233 aa22.47■■□□□ 1.19
LIN54-208ENST00000509748 MAP3K7CLP57077 242 aa22.47■■□□□ 1.19
LIN54-208ENST00000509748 ADGRG2Q8IZP9 1017 aa22.47■■□□□ 1.19
LIN54-208ENST00000509748 NT5C1AQ9BXI3 368 aa22.47■■□□□ 1.19
LIN54-208ENST00000509748 GMIPQ9P107 970 aa22.47■■□□□ 1.19
LIN54-208ENST00000509748 TRIM49BA6NDI0 452 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 CHURC1-FNTBB4DL54 471 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 CD58P19256 250 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 DRD1P21728 446 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 ADORA2BP29275 332 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 FNTBP49356 437 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 MXI1P50539 228 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 FKBP3Q00688 224 aaKnown RBP22.46■■□□□ 1.19
LIN54-208ENST00000509748 CLEC20AQ6ZU45 233 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 GPRIN1Q7Z2K8 1008 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 FILIP1Q7Z7B0 1213 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 FBXL13Q8NEE6 735 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 CYFIP2Q96F07 1278 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 FAXDC2Q96IV6 333 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 CCSER2Q9H7U1 834 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 RAB20Q9NX57 234 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 CFAP97Q9P2B7 532 aa22.46■■□□□ 1.19
LIN54-208ENST00000509748 SMG5Q9UPR3 1016 aaKnown RBP22.46■■□□□ 1.19
LIN54-208ENST00000509748 MYO16Q9Y6X6 1858 aa22.45■■□□□ 1.19
LIN54-208ENST00000509748 SLC16A3O15427 465 aaKnown RBP22.45■■□□□ 1.18
LIN54-208ENST00000509748 HRO43593 1189 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 GADD45BO75293 160 aaPredicted RBP22.45■■□□□ 1.18
LIN54-208ENST00000509748 MBL2P11226 248 aaPredicted RBP22.45■■□□□ 1.18
LIN54-208ENST00000509748 CD44P16070 742 aaKnown RBP22.45■■□□□ 1.18
LIN54-208ENST00000509748 BMP6P22004 513 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 OPRD1P41143 372 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 CBWD6Q4V339 395 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 CBWD3Q5JTY5 395 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 CBWD5Q5RIA9 395 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 HECTD3Q5T447 861 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 CD101Q93033 1021 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 TATDN2Q93075 761 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 TSG101Q99816 390 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 GTPBP4Q9BZE4 634 aaKnown RBP22.45■■□□□ 1.18
LIN54-208ENST00000509748 MAN1B1Q9UKM7 699 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 COQ4Q9Y3A0 265 aa22.45■■□□□ 1.18
LIN54-208ENST00000509748 SCAMP3O14828 347 aaKnown RBP22.44■■□□□ 1.18
LIN54-208ENST00000509748 STX10O60499 249 aa22.44■■□□□ 1.18
LIN54-208ENST00000509748 RNF40O75150 1001 aa22.44■■□□□ 1.18
LIN54-208ENST00000509748 NFATC1O95644 943 aa22.44■■□□□ 1.18
LIN54-208ENST00000509748 CYP17A1P05093 508 aa22.44■■□□□ 1.18
LIN54-208ENST00000509748 FAM200BP0CF97 657 aa22.44■■□□□ 1.18
LIN54-208ENST00000509748 TUBP50607 506 aa22.44■■□□□ 1.18
LIN54-208ENST00000509748 LRRC63Q05C16 580 aa22.44■■□□□ 1.18
LIN54-208ENST00000509748 NR1H3Q13133 447 aa22.44■■□□□ 1.18
LIN54-208ENST00000509748 ISM2Q6H9L7 571 aa22.44■■□□□ 1.18
LIN54-208ENST00000509748 WBP2Q969T9 261 aa22.44■■□□□ 1.18
LIN54-208ENST00000509748 ARID3AQ99856 593 aa22.44■■□□□ 1.18
LIN54-208ENST00000509748 POLR3BQ9NW08 1133 aaPredicted RBP22.44■■□□□ 1.18
LIN54-208ENST00000509748 KIAA1549LQ6ZVL6 1849 aa22.43■■□□□ 1.18
LIN54-208ENST00000509748 PPP1R26Q5T8A7 1209 aaPredicted RBP22.43■■□□□ 1.18
LIN54-208ENST00000509748 RHBDF2Q6PJF5 856 aa22.43■■□□□ 1.18
LIN54-208ENST00000509748 LONP2Q86WA8 852 aa22.43■■□□□ 1.18
LIN54-208ENST00000509748 KIAA2013Q8IYS2 634 aa22.43■■□□□ 1.18
LIN54-208ENST00000509748 CCDC150Q8NCX0 1101 aa22.43■■□□□ 1.18
LIN54-208ENST00000509748 FBXO44Q9H4M3 255 aa22.43■■□□□ 1.18
LIN54-208ENST00000509748 HOOK1Q9UJC3 728 aaKnown RBP22.43■■□□□ 1.18
LIN54-208ENST00000509748 SDK1Q7Z5N4 2213 aa22.42■■□□□ 1.18
LIN54-208ENST00000509748 E2F8A0AVK6 867 aa22.42■■□□□ 1.18
LIN54-208ENST00000509748 RAD23BP54727 409 aa22.42■■□□□ 1.18
LIN54-208ENST00000509748 SRSF5Q13243 272 aaKnown RBP22.42■■□□□ 1.18
LIN54-208ENST00000509748 DHCR24Q15392 516 aa22.42■■□□□ 1.18
LIN54-208ENST00000509748 FBXO43Q4G163 708 aa22.42■■□□□ 1.18
LIN54-208ENST00000509748 HEATR6Q6AI08 1181 aaKnown RBP22.42■■□□□ 1.18
LIN54-208ENST00000509748 DDX42Q86XP3 938 aaKnown RBP eCLIP22.42■■□□□ 1.18
LIN54-208ENST00000509748 SLC4A11Q8NBS3 891 aa22.42■■□□□ 1.18
LIN54-208ENST00000509748 SLC35C1Q96A29 364 aa22.42■■□□□ 1.18
LIN54-208ENST00000509748 DHTKD1Q96HY7 919 aaPredicted RBP22.42■■□□□ 1.18
LIN54-208ENST00000509748 DUSP9Q99956 384 aaKnown RBP22.42■■□□□ 1.18
LIN54-208ENST00000509748 PNPLA8Q9NP80 782 aa22.42■■□□□ 1.18
LIN54-208ENST00000509748 CISHQ9NSE2 258 aa22.42■■□□□ 1.18
LIN54-208ENST00000509748 OSER1Q9NX31 292 aa22.42■■□□□ 1.18
LIN54-208ENST00000509748 SCML2Q9UQR0 700 aa22.42■■□□□ 1.18
LIN54-208ENST00000509748 ANTXRLA6NF34 631 aa22.41■■□□□ 1.18
LIN54-208ENST00000509748 PPP1R3GB7ZBB8 358 aa22.41■■□□□ 1.18
LIN54-208ENST00000509748 SLC9A3R1O14745 358 aaPredicted RBP22.41■■□□□ 1.18
LIN54-208ENST00000509748 ATG13O75143 517 aa22.41■■□□□ 1.18
LIN54-208ENST00000509748 TGM1P22735 817 aa22.41■■□□□ 1.18
LIN54-208ENST00000509748 ZNF394Q53GI3 561 aa22.41■■□□□ 1.18
LIN54-208ENST00000509748 DCAF17Q5H9S7 520 aaPredicted RBP22.41■■□□□ 1.18
LIN54-208ENST00000509748 TCERG1LQ5VWI1 586 aa22.41■■□□□ 1.18
LIN54-208ENST00000509748 WDR5BQ86VZ2 330 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms